Journal: Tree genetics & genomes / Journal name: Tree genetics & genomes / Subject: 3 selected

Author:: Yuan-Yuan Li; Dong Meng; Mingjun Li; Lailiang Cheng
Source:: Tree genetics & genomes 2016 v.12 no.4 pp. 82
ISSN:: 1614-2942
Subject:: Malus domestica; apples; basic-leucine zipper transcription factors; drought; fruiting; gene expression regulation; genes; growth and development; leaves; leucine zipper; models; plant growth; quantitative polymerase chain reaction; reverse transcriptase polymerase chain reaction; roots; salt stress; stress response; stress tolerance; transcription (genetics)
Abstract:: ... The basic leucine zipper (bZIP) family is one of the largest transcription factor (TF) families in plants, which play crucial roles in plant growth and development. bZIP proteins are involved in multiple biological processes, as well as responses to various biotic/abiotic stresses. Although genome-wide analysis of the bZIP gene family has been conducted in several plant species, only few comprehen ...
DOI:: 10.1007/s11295-016-1043-6
: https://doi.org/10.1007/s11295-016-1043-6

Author:: Judith Bowen; Hilary S. Ireland; Ross Crowhurst; Zhiwei Luo; Amy E. Watson; Toshi Foster; Nigel Gapper; Jim J. Giovanonni; James P. Mattheis; Chris Watkins; David Rudell; Jason W. Johnston; Robert J. Schaffer
Source:: Tree genetics & genomes 2014 v.10 no.3 pp. 751-759
ISSN:: 1614-2942
Subject:: Malus domestica; apples; data collection; essential genes; fruiting; gene expression; genomics; messenger RNA; phosphoprotein phosphatase; phytochrome; quantitative polymerase chain reaction; ubiquitination; variance
Abstract:: ... To accurately measure gene expression using PCR-based approaches, there is the need for reference genes that have low variance in expression (housekeeping genes) to normalise the data for RNA quantity and quality. For non-model species such as Malus x domestica (apples), previously, the selection of reference genes relied on using homology to reference genes in model species. In this study, a geno ...
DOI:: 10.1007/s11295-014-0720-6
: https://doi.org/10.1007/s11295-014-0720-6

Author:: Cevik, Volkan; Ryder, Carol D.; Popovich, Alexandra; Manning, Kenneth; King, Graham J.; Seymour, Graham B.
Source:: Tree genetics & genomes 2010 v.6 no.2 pp. 271-279
ISSN:: 1614-2942
Subject:: Arabidopsis; Malus domestica; analysis of variance; apples; dehiscence; firmness; fruiting; fruits; genes; genetic variation; linkage groups; loci; phenotypic variation; progeny; texture
Abstract:: ... The FRUITFULL (FUL) and SHATTERPROOF (SHP) genes are involved in regulating fruit development and dehiscence in Arabidopsis. We tested the hypothesis that this class of genes are also involved in regulating the development of fleshy fruits, by exploring genetic and phenotypic variation within the apple (Malus domestica) gene pool. We isolated and characterised the genomic sequences of two candidat ...
DOI:: 10.1007/s11295-009-0247-4
: https://doi.org/10.1007/s11295-009-0247-4

Author:: Gleave, Andrew P.; Ampomah-Dwamena, Charles; Berthold, Susann; Dejnoprat, Supinya; Karunairetnam, Sakuntala; Nain, Bhawana; Wang, Yen-Yi; Crowhurst, Ross N.; MacDiarmid, Robin M.
Source:: Tree genetics & genomes 2008 v.4 no.2 pp. 343-358
ISSN:: 1614-2942
Subject:: proteins; messenger RNA; Arabidopsis; apples; flowering; rice; data collection; acids; expressed sequence tags; gene expression; microRNA; Malus domestica; fruiting; leaves
Abstract:: ... Microribonucleic acids (miRNAs) are small, non-coding RNAs that play important regulatory roles by down-regulating target transcripts in a sequence-specific manner. The miRBase Registry (Release 8.2) lists 732 miRNAs from flowering plant species, with the majority identified from Arabidopsis, rice and poplar where genome sequence is available. In the absence of genomic sequence and on the basis th ...
DOI:: 10.1007/s11295-007-0113-1
: https://doi.org/10.1007/s11295-007-0113-1

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