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... The Asian black bear inhabiting the Shimokita Peninsula, the northernmost part of Honshu, Japan, is categorized as one of the endangered local populations (LPs) in the list of threatened species under the Endangered Species Act. The Shimokita population has become geographically isolated and fragmented due to recent human activity. In this study, we conducted DNA sampling between 2005–2007 of two ...
Martes; genetic variation; genotype; lakes; microsatellite repeats; mountains; population structure; rivers; Japan; Russia
Abstract:
... To assess the genetic variation and population structure of the sable Martes zibellina on eastern Hokkaido, Japan, we analyzed genotypes of 12 microsatellite loci on 48 individuals. Genotypes for all individuals examined were found to be different from each other. Mean observed and expected heterozygosites and allelic richness were calculated to be 0.52 (0.02–0.80), 0.58 (0.02– 0.79) and 5.49, res ...
... Horizontal and elevational distributions of Apodemus peninsulae, A. draco and A. latronum are illustrated. A total of 1,355 museum specimens were identified by their cranial measurements and the size of t7 cusp on the first upper molar in 180 localities of Russia, Mongolia, China, Taiwan, Korea, Myanmar, India and Japan. Apodemus peninsulae belonged to “the northern pattern”, A. draco to “the sout ...
... We studied insectivory by five carnivores—the Asiatic black bear (Ursus thibetanus), Japanese marten (Martes melampus), Japanese badger (Meles meles), red fox (Vulpes vulpes), and raccoon dog (Nyctereutes procyonoides)—in a cool-temperate deciduous forest in Japan. From May 2003 to April 2005, we assayed 373 fecal samples (91 from bear, 158 from marten, 43 from badger, 36 from fox, and 45 from rac ...
... Phylogenetic analysis was conducted for various populations of the Sorex minutissimus-S. yukonicus complex based on mitochondrial gene (cytochrome b and/or the control region) sequences. Sorex minutissimus was divided into some monophyletic groups in Eurasia; it was divided into 2 main groups, eastern and western Eurasian clades, based on combined data of the cytochrome b and the control region. M ...
... Mesowear analysis, one of the methods for reconstructing diets based on facet development on the occlusal surface of cheek teeth, has been applied mainly in extinct ungulates. To test how mesowear variables differ in same species from different habitats, this study investigated sika deer (Cervus nippon) from four localities (Urahoro, Nikko, Tsushima Islands, and Yakushima Island) in Japan. Data on ...
Apodemus speciosus; alleles; body length; feet; habitat preferences; head; islands; mice; tail; Japan
Abstract:
... We analyzed morphological variation in external traits of Apodemus speciosus using 1,799 individuals collected throughout its entire distribution range. Clear geographic patterns were not observed in head and body length. Tail length was greater in the Hokkaido and Tokara-Nakanoshima populations and smaller in the Oki Islands populations. Ear length showed geographic trends within the Honshu popul ...
Cervus nippon; autumn; climate; deer; females; home range; juveniles; males; melting; migratory behavior; snow; snowmelt; summer; temperature; Japan
Abstract:
... Studies on migration pattern of sika deer in Japan are limited. We captured 27 sika deer and identified movement for 24 deer (17 females and 7 males) from 2008 to 2011 in Kirigamine Highland, Nagano, central Japan. Four juvenile males dispersed from their original home range, and we documented migration pattern for 23 deer (17 females and 6 males), including 3 dispersed males. Deer exhibited parti ...
Myotis; cytochrome b; habitats; haplotypes; insectivores; mitochondrial DNA; mountains; phylogeography; population structure; principal component analysis; rivers; Japan
Abstract:
... Rivers are habitats favored by insectivorous bats. The Japanese large-footed bat (Myotis macrodactylus) is one of such species strongly associated with rivers. To clarify the population structure and migration pattern of M. macrodactylus, mitochondrial DNA (mtDNA) phylogeography was investigated in 15 subpopulations along three rivers (Tokachi, Ishikari and Teshio Rivers) on Hokkaido Island, north ...
Cervus nippon; autumn; bamboos; deer; forage; global positioning systems; grasses; home range; migratory behavior; mountains; snow; summer; wildlife; winter; Japan
Abstract:
... Movements and seasonal home ranges of 6 GPS collared sika deer were investigated at the Oku-Chichibu Mountains, central Honshu, from April 2009 to March 2010. All deer migrated between discrete summer and winter home ranges. The linear migration distance ranged from 2.5 to 31.9 km. Mean elevation during the summer and the winter ranged from 980 to 1,782 m, and from 1,204 to 1,723 m, respectively. ...
Capricornis; Cervus nippon; DNA; defecation; discriminant analysis; feces; pellets; species identification; surveys; ungulates; Japan
Abstract:
... The fecal pellets and fecal pellet group characters of two ungulates, the Japanese serow and sika deer, were compared in Tokushima, Japan, where the species occur sympatrically. Species identification based on 82 fecal DNA samples revealed that 28 and 54 fecal pellet groups were from Japanese serow and sika deer, respectively. The mean values of three fecal pellet groups characters, the maximum di ...
Bryopsida; Eothenomys; environmental factors; forests; mountains; principal component analysis; regression analysis; trapping; traps; valleys; voles; Japan
Abstract:
... The relationship between environmental factors and the occurrence of the Smith's redbacked vole, Eothenomys smithii, was analyzed first by principle component analysis (PCA) to select factors and suitability of fit between capturing results of the voles, and subsequently by multiple regression analysis (MRA) to identify significant environmental factors affecting the occurrence of the vole. Six re ...
Suncus murinus; captive animals; floors; foraging; grasslands; habitats; home range; laboratory animals; males; nocturnal activity; radio telemetry; residential areas; shrews; surveys; Japan
Abstract:
... The Asian house shrew (Suncus murinus) is a commensal species whose has become widespread across the Old World due to human activities. This species has been well studied in captivity as a laboratory animal; however, in the wild, its ecological habits are not well investigated. We conducted radio-telemetry surveys to determine home range, habitat selection, and activity patterns of the Asian house ...
Martes; alleles; farms; fur; genetic distance; genetic polymorphism; genetic variation; heterozygosity; introduced species; loci; microsatellite repeats; random mating; Japan
Abstract:
... The Japanese marten Martes melampus occurring on Hokkaido Island, Japan, is a domestic alien species, artificially introduced from their native distributional range. To reveal the genetic variation within the Hokkaido marten population and their relationships with native populations, we genotyped 14 individuals from Hokkaido using 10 microsatellite loci, and compared the genotype data with those o ...
Physeter macrocephalus; body length; breeding; coasts; females; gender differences; lifestyle; males; sexual dimorphism; skull; Japan
Abstract:
... By using skulls of sperm whales (Physeter macrocephalus), we analyzed the relative growth of skull length in relation to that of body length. We also analyzed the growth of various parts of the skull in relation to skull length. We used data of 3 males and 1 female collected off the coast of Japan and those of 4 males reported previously. In males, the proportion of skull length to body length inc ...
Callosciurus; acoustics; antipredatory behavior; control methods; invasive species; monitoring; predators; squirrels; surveys; Japan
Abstract:
... The Pallas's squirrel (Callosciurus erythraeus) is one of the invasive alien species in Japan. Although control measures for this species have been attempted for a long time, the eradication has not succeeded and the populations continue to increase. To initiate control of the invasive alien squirrels as soon as possible, we have to detect their existence at low density stage soon after colonizati ...
Symplocarpus foetidus; Ursus thibetanus; eating habits; feces; foods; foraging; habitats; heathlands; national parks; nutrient content; nutrition; summer; Japan
Abstract:
... We investigated the food habits of Asiatic black bears (Ursus thibetanus) in Oze National Park, Japan, and analyzed the abundance and nutritional content of skunk cabbage (Lysichiton camtschatcense) to evaluate the quality of moorland habitat for foraging bears. Analysis of 141 scats collected from August 2005 to September 2009 revealed that spadices of skunk cabbage were important food items in s ...
DNA; Martes; females; forests; genetic markers; home range; males; monitoring; urine; wintering grounds; Japan
Abstract:
... In order to assess importance of isolated forests as the wintering habitat of the sable (Martes zibellina) in eastern Hokkaido, Japan, we performed DNA analyses on 59 samples noninvasively collected in field (54 fecal, 3 urine and 2 hair samples). Consequently, 46 (41 fecal, 3 urine and 2 hair samples) of the 59 samples were recognized to have dropped from the sable. In addition, we successfully i ...
... The vertical distribution of introduced Siberian weasels Mustela sibirica and endemic Japanese weasels M. itatsi in the Seburi Mountains in Kyushu, Japan, was examined from October 1996 to February 1998. Siberian weasels occurred near villages with paddy and cultivated fields, whereas Japanese weasels occurred in grasslands and plantations. The dispersion of yearlings destabilized the distribution ...
... Recently, the range of the deer has expanded worldwide, with dramatic increases in abundance; yet relatively little is known about how these increases influence other mammals at high trophic levels. A recent study showed that high deer density exerts cascading effects on raccoon dogs, omnivorous carnivores, because of any increase in their prey abundance in Oku-Nikko, Japan. Here, we examined the ...
Cervus nippon; deer; feces; hills; information management; microsatellite repeats; mountains; national parks; Japan
Abstract:
... To provide information for the management of sika deer in Tsurugi Quasi-National Park, Shikoku, Japan, we analyzed population genetic structure and migration patterns in the national park and surrounding areas based on from six to seven microsatellite loci using tissue and fecal samples. Bayesian clustering divided the deer into two populations, the Tokushima population and the Kochi population. T ...
... Bats that typically forage in the forest understorey can be difficult to capture using mist nets or harp traps alone. We assessed the effectiveness of an ultrasonic lure for increasing capture rates of vespertilionid bats in two forest zones in Japan. One sequence of stimuli was modelled on social calls of four species that typically forage in narrow-space; the other on those of four species that ...
Gliridae; correlation; forests; linear models; microhabitats; nest boxes; nesting; trees; Japan
Abstract:
... To investigate the factors that influence resting site preference of the Japanese dormouse Glirulus japonicus, we determined the effect of tree resources in a microhabitat on the use of nest boxes as daytime resting sites. The study area, which was in Mt. Nagakura National Forest in central Japan, was divided into 200 plots. In each plot, a nest box specially designed to harbor dormice was attache ...
... Patterns of evolution can be biased by patterns of variability (propensity to vary). However, the effects of variability on evolution at the geographic and inter-subspecies levels have not been investigated extensively. Variation between different populations is the result of evolution. Individual variation within a single population can be indicative of species variability. Therefore, comparing p ...
Vulpes vulpes; analysis of variance; body size; climatic factors; eating habits; females; geographical variation; males; muscles; principal component analysis; skull; snow; temperature; Japan
Abstract:
... To investigate the morphological variation in an island population of the red fox (Vulpes vulpes), we measured 25 cranial and 24 dental characters for 225 specimens (137 males and 88 females) from Hokkaido Island, Japan. A Bayesian principal component analysis found only small differences among three groups identified genetically in previous studies. Concretely, analyses of variance and post-hoc t ...
Sus scrofa; adults; bioinformatics; boars; crossing; habitat preferences; habitats; hunters; linear models; microsatellite repeats; mitochondrial DNA; mutation; population genetics; questionnaires; risk; surveys; wild boars; wildlife management; Japan
Abstract:
... This study is a “model study” of how to apply the findings of molecular ecological studies to wildlife management, aimed at showing the importance of analyses integrating population genetics, space-time information and bioinformatics methods. We chose the Japanese wild boar (Sus scrofa leucomystax) in Tochigi Prefecture, Japan, because its captured area has been spreading in recent years. We used ...
... Averages of external and cranial measurements were correlated with latitudes in Apodemus peninsulae, A. draco, and A. latronum in East Asia and Siberia. A total of 852 sexually mature specimens of 24–44 local populations were grouped into 5–11 regions by countries, provinces of China, running directions of big rivers in south-western China and Myanmar, or islands. In A. peninsulae, significant pos ...
... We examined the population genetic structure of the Asian black bear (Ursus thibetanus) in a large continuous habitat in northern Japan. To determine how population subdivision relates to management units (MUs) proposed by the Ministry of the Environment, genetic variation in the mitochondrial DNA control region (mtDNA-CR) and seven autosomal microsatellite loci was assessed in bears captured in s ...
... Ungulate populations such as deer and wild boars have been expanding in range and increasing in number throughout many areas of the world. Regulation of these overabundant populations is urgently needed. For an effective culling program addressing these overabundant populations, it is essential to have information on the activity pattern of animals. To determine the factors affecting seasonality o ...
... We researched seasonal reproductive activity in the lesser Japanese mole, Mogera imaizumii, by morphometrical and histological methods for male internal genitalia using samples from Kanagawa Pref., central Honshu, Japan. On the basis of the weights of testis and the epididymis, we determined that their weights become higher during February–April. On the other hand, the histological profiles of sem ...
Rhinolophus ferrumequinum; anthropogenic activities; Japan
Abstract:
... The greater horseshoe bat, Rhinolophus ferrumequinum, is a large cave-dwelling bat and is commonest among cave-dwelling bat species in Japan. Cave-dwelling bats are very sensitive during the maternity season, and disturbance to maternity colonies often results in a serious impact on regional populations. However, a casual observation revealed R. ferrumequinum overcame serious accidental human dist ...
Mus musculus; body length; cytochrome b; genes; head; islands; mice; mitochondria; mitochondrial genome; tail; Eurasia; Europe; Japan; Northern European region
Abstract:
... On the Miura Peninsula of central Honshu, Japan, there are international ports that, it is concerned, provide opportunities for the introduction of house mice via overseas cargoes. To evaluate the occurrence of such an introduction of overseas mice, in this study, we analyzed mitochondrial cytochrome b (Cytb) gene and the morphological characteristics of house mouse (Mus musculus) samples (n = 47) ...
Tursiops aduncus; coasts; dolphins; group size; photographs; surveys; Japan
Abstract:
... Surveys for the occurrence, distribution, and individual identification of Indo-Pacific bottlenose dolphins Tursiops aduncus were conducted around Amami Oshima Island, Kagoshima Prefecture, Japan from 2007 to 2013. The dolphins were primarily distributed in the areas where the survey effort was concentrated, particularly in Oshima Strait and on the western coast of the Island. In total, 33 groups ...
Tursiops aduncus; coasts; data collection; dolphins; females; males; philopatry; Japan
Abstract:
... Indo-Pacific bottlenose dolphins (Tursiops aduncus) off Amakusa-Shimoshima, approximately 200 individuals, form relatively large groups frequently exceeding 100 individuals and show high site fidelity to the area around Tsuji Island, northern coast of Amakusa-Shimoshima. This suggests that individual dolphins may have long interaction times with many other individuals. Consequently, competition be ...
... Occurrence of bark-feeding damage by sika deer (Cervus nippon) was examined at 26 mixed plantations comprised of both sugi (Cryptomeria japonica) and hinoki cypress (Chamaecyparis obtusa) in Mie Prefecture, central Japan. There was no significant difference in damage ratios with the tree species in plantations with only slight damage. In plantations with a damage ratio over 5% in either tree speci ...
Capricornis; Dasytricha ruminantium; Entodinium; Epidinium; Protozoa; fauna; rumen; ruminants; Japan
Abstract:
... Ciliate fauna collected from the rumens of eight wild Japanese serows (Capricornis crispus) captured in the northern part of Shizuoka Prefecture, Japan, were compared with the ciliate faunas found in other Japanese wild ruminants. We identified six species belonging to two genera of ciliates (Entodinium nanellum, Ent. minimum, Ent. simplex, Ent. dubardi, Ent. longinucleatum, and Elytroplastron bub ...
... Using fecal analyses, we examined the food habits of three large herbivorous mammals, the sika deer (Cervus nippon), the Japanese serow (Capricornis crispus), and the wild boar (Sus scrofa) on Mt. Asama, central Japan. Ten fecal samples were collected in all four seasons during 2012–2013, although boar feces were not available in summer because of high-level dung beetle activity. The proportions o ...
Cervus nippon; deer; forest habitats; forestry; herds; population density; population size; surveys; Japan
Abstract:
... Sika deer (Cervus nippon) populations in Hokkaido have irrupted during the last three decades, causing severe damage to agriculture and forestry. Methods have been developed to estimate their population size on large but not on small scales. We estimated deer density using distance sampling to analyze the feasibility of employing the line-transect method in forested habitats on a management-distri ...
Ursus arctos; biodiversity conservation; carnivores; high energy foods; human-wildlife relations; humans; issues and policy; landscapes; models; mortality; population growth; stakeholders; urban areas; wildlife management; Japan
Abstract:
... Recently, brown bears have moved deeper inside urban areas in Sapporo, the fifth-largest city with a population of 1.9 million in Japan. Here, I review urban large carnivore management and its human dimension and discuss how to create a model of harmonious coexistence that includes both management of human—brown bear conflict (HBC) and conservation of the lush, green environment of Sapporo. Althou ...
... We studied the summer (June–August) diet of the masked palm civet (Paguma larvata) in a suburban area of Ibaraki Prefecture, using the stomach contents from road-killed carcasses. Specifically, our aim was to examine (i) monthly changes and (ii) if food habits differed between sexes, based on frequency of occurrence (FO) of the main food classes consumed. From 2009 to 2014, 61 civet carcasses were ...
Callorhinus ursinus; adults; breeding; coasts; females; habitat preferences; islands; juveniles; males; seals; Japan; Pacific Ocean; Russia; Sea of Japan
Abstract:
... Northern fur seals (Callorhinus ursinus) disperse to broad areas and overwinter in the North Pacific Ocean during the non-breeding season. Fur seals breeding on islands off Russia mainly overwinter in the Sea of Japan and the off Pacific side of Japan in this season. Although the distribution of fur seals seems to vary with sexes and growth stages in this season, there is little information around ...
... Three male anomalously white Risso's dolphins Grampus griseus were observed in the waters off Taiji, Wakayama, Japan. One (GG-1) was captured alive in 2007, and the other two (GG-2 and GG-3) were captured in 2014. The color pattern of GG-1 is approximately divided into two parts; the middle of the trunk and the lower part of the dorsal fin are white, whereas the anterior and caudal portions have d ...
... Mammal-plant interactions differ significantly between urban and natural environments; however, knowledge of mammal-pollinated plants in urban areas remains limited compared to plants in their natural habitats. Here, we compared the flower visitors of Mucuna macrocarpa between urban and forested areas in Okinawa-jima Island, Japan and in Taiwan. Mucuna macrocarpa requires a highly specialized poll ...
... We examined the relationship between the feeding habits of Asian black bears (Ursusthibetanus) and fruit availability during summer and autumn from 2008 to 2011 in the Ashio-Nikko Mountains, Japan. Our main questions were as follows: 1) How does the availability of multiple fruit species influence the feeding habits during summer and autumn? and 2) When do bears begin to forage on hard mast in rel ...
... In recent decades, invasive animals have disturbed the native ecosystem, via intraspecific and interspecific genetic hybridization. Previously, maternally-inherited mitochondrial DNA analysis detected two genetically distinct lineages of the sika deer (Cervus nippon) in the Japanese Archipelago and revealed the coexistence of both lineages mainly in the central part of Toyama Prefecture in Japan. ...
... In Japan, red foxes (Vulpes vulpes) and raccoon dogs (Nyctereutes procyonoides) have been observed using burrows made by Japanese badgers (Meles anakuma). However, basic information, including how and when the species share the burrows, is scarce. In this study, a camera trap was set at a burrow entrance used by badgers, and different mammals that used the burrow were investigated. Burrow uses by ...
Vulpes vulpes; adults; feces; foxes; gene flow; genetic variation; genotyping; microsatellite repeats; population size; urban areas; Japan
Abstract:
... Mt. Hakodate, Hokkaido, is a small mountain geographically isolated by the sea and urban area, and some red foxes (Vulpes vulpes) live there. In consideration of the specific geographical environment, we made a hypothesis that the fox population on Mt. Hakodate is small in size and isolated, and consequently its genetic variation is low, and then tested it. To investigate the genetic variation, we ...
Crocidura; DNA; cytochrome b; genes; heterozygosity; mitochondria; mitochondrial genome; mutation; nucleotide sequences; phylogeny; phylogeography; shrews; Japan; South Korea
Abstract:
... The Japanese white-toothed shrew (Crocidura dsinezumi) is a species endemic to Japan. For this species, only minimal phylogeographic investigations have been conducted. We obtained DNA sequences of mitochondrial cytochrome b and control region and nuclear ApoB genes for 191 individuals of C. dsinezumi from 107 locations collected throughout its known range. In the phylogenetic trees based on mitoc ...
Ursus thibetanus; adults; females; food availability; lactation; life history; parturition; progeny; reproductive success; yearlings; Japan
Abstract:
... Very little is known about the cementum annuli of Asian black bears (Ursus thibetanus). We collected the first premolar tooth from adult female bears in central Japan to investigate whether reproductive history was reflected in cementum annuli width; previous studies have indicated that this is possible in other bear species. We calculated the proportional width index (PWI) value as an index of an ...
Apodemus argenteus; B chromosomes; X chromosome; aneuploidy; females; fluorescence; karyotyping; mice; mountains; quinacrine; staining; Japan
Abstract:
... We studied an occurrence of chromosomal aneuploidy for ten individuals in the small Japanese field mouse, Apodemus argenteus, from the western mountainous area of Kanagawa Prefecture, Honshu, Japan. Eight of the individuals examined showed the standard 2n = 46 and FNa = 48 constitutions as the most frequent karyotype. However, of those eight individuals, seven carried an inter-cellular mosaicism w ...