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PloS one
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7987-2013
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v.8 no.6
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- Author:
- El-Desouky Ammar; Rocco Alessandro; Robert G. Shatters Jr; David G. Hall; Dan Zilberstein
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- sap; mass spectrometry; insects; Diaphorina citri; adults; sugars; Psyllidae; greening disease; males; nymphs; Citrus; females; leaves; metabolism; phloem; honeydew; pellets; eggs; integument; waxes; excretion; abdomen; microscopy; droplets; molting; anus; bacteria
- Abstract:
- ... The Asian citrus psyllid (ACP), Diaphorina citri (Hemiptera: Psyllidae) is the primary vector of the bacterium causing citrus huanglongbing (citrus greening), the most serious disease of citrus worldwide. Psyllids and other hemipterans produce large amounts of honeydew, which has been used previously as an indicator of phloem sap composition and insect feeding or metabolism. Behavioral, ultrastruc ...
- DOI:
- 10.1371/journal.pone.0064938
- PubMed:
- 23762268
- PubMed Central:
- PMC3677883
- https://doi.org/10.1371/journal.pone.0064938
- Author:
- Jason A. Peiffer; Sherry A. Flint-Garcia; Natalia De Leon; Michael D. McMullen; Shawn M. Kaeppler; Edward S. Buckler; Ive De Smet
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- Zea mays; cellulose; chromosome mapping; corn; corn stover; crossing; genetic polymorphism; genetic variation; genome; heritability; inbred lines; loci; lodging; phenotypic variation; phenylpropanoids; prediction; quantitative trait loci; strength (mechanics); vegetative growth
- Abstract:
- ... Stalk strength is an important trait in maize (Zea mays L.). Strong stalks reduce lodging and maximize harvestable yield. Studies show rind penetrometer resistance (RPR), or the force required to pierce a stalk rind with a spike, is a valid approximation of strength. We measured RPR across 4,692 recombinant inbreds (RILs) comprising the maize nested association mapping (NAM) panel derived from cro ...
- Handle:
- 10113/56904
- DOI:
- 10.1371/journal.pone.0067066
- PubMed:
- 23840585
- PubMed Central:
- PMC3688621
- https://doi.org/10.1371/journal.pone.0067066
- Author:
- Lifan Zhang; Michelle R. Mousel; Xiaolin Wu; Jennifer J. Michal; Xiang Zhou; Bo Ding; Michael V. Dodson; Nermin K. El-Halawany; Gregory S. Lewis; Zhihua Jiang; Zhanjiang Liu
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- Polypay; Rambouillet; Targhee; autosomes; biodiversity; breed differences; breeding; genes; genetic variation; phylogeny; sheep; single nucleotide polymorphism; United States
- Abstract:
- ... Sheep are among the major economically important livestock species worldwide because the animals produce milk, wool, skin, and meat. In the present study, the Illumina OvineSNP50 BeadChip was used to investigate genetic diversity and genome selection among Suffolk, Rambouillet, Columbia, Polypay, and Targhee sheep breeds from the United States. After quality-control filtering of SNPs (single nucle ...
- DOI:
- 10.1371/journal.pone.0065942
- PubMed:
- 23762451
- PubMed Central:
- PMC3677876
- https://doi.org/10.1371/journal.pone.0065942
- Author:
- Alison Lacombe; Robert W. Li; Dorothy Klimis-Zacas; Aleksandra S. Kristo; Shravani Tadepalli; Emily Krauss; Ryan Young; Vivian C. H. Wu; Ramy K. Aziz
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- Actinomycetales; Bifidobacteriaceae; Coriobacteriaceae; Enterococcus; Lactobacillus; biodegradation; bioinformatics; blueberries; colon; diet; epithelial cells; genes; glycosaminoglycans; intestinal microorganisms; metabolism; open reading frames; optimal nutrition; rats; sequence analysis; xenobiotics
- Abstract:
- ... The gastrointestinal tract is populated by an array of microbial species that play an important role in metabolic and immune functions. The composition of microorganisms is influenced by the components of the host’s diet and can impact health. In the present study, dietary enrichment of lowbush wild blueberries (LWB) was examined to determine their effect on colon microbial composition and their p ...
- DOI:
- 10.1371/journal.pone.0067497
- PubMed:
- 23840722
- PubMed Central:
- PMC3696070
- https://doi.org/10.1371/journal.pone.0067497
- Author:
- Linxi Yuan; Yuanyuan Zhu; Zhi-Qing Lin; Gary Banuelos; Wei Li; Xuebin Yin; Richard G. Haverkamp
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- Arabidopsis; Brassica juncea; Cardamine; Stanleya; drainage; fluorescence; hydrides; hyperaccumulators; leaves; liquid chromatography; metabolism; mine tailings; roots; sediments; selenium; selenomethionine; spectroscopy; stems; China
- Abstract:
- ... Plant samples of Cardamine hupingshanesis (Brassicaceae), Ligulariafischeri (Ledeb.) turcz (Steraceae) and their underlying top sediments were collected from selenium (Se) mine drainage areas in Enshi, China. Concentrations of total Se were measured using Hydride Generation-Atomic Fluorescence Spectrometry (HG-AFS) and Se speciation were determined using liquid chromatography/UV irradiation-hydrid ...
- DOI:
- 10.1371/journal.pone.0065615
- PubMed:
- 23750270
- PubMed Central:
- PMC3672165
- https://doi.org/10.1371/journal.pone.0065615
- Author:
- Michael B. Blackburn; Phyllis A. W. Martin; Daniel Kuhar; Robert R. Farrar; Dawn E. Gundersen-Rindal; Raymond Schuch
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- Bacillus thuringiensis; hydrolysis; multilocus sequence typing; phenotype; phenotypic variation; phylogeny; soil; sucrose; urease
- Abstract:
- ... Diverse isolates from a world-wide collection of Bacillus thuringiensis were classified based on phenotypic profiles resulting from six biochemical tests; production of amylase (T), lecithinase (L), urease (U), acid from sucrose (S) and salicin (A), and the hydrolysis of esculin (E). Eighty two isolates representing the 15 most common phenotypic profiles were subjected to phylogenetic analysis by ...
- DOI:
- 10.1371/journal.pone.0066061
- PubMed:
- 23762464
- PubMed Central:
- PMC3677866
- https://doi.org/10.1371/journal.pone.0066061
- Author:
- Brandie M. Cross; Anniesha Hack; Timothy A. Reinhardt; Rajini Rao; Alexander G. Obukhov
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- Ca2-transporting ATPase; basement membrane; breast neoplasms; calcium; epithelial cells; ion transport; lactation; mammary glands; mice; milk secretion; models; plasma membrane; prolactin
- Abstract:
- ... An unconventional interaction between SPCA2, an isoform of the Golgi secretory pathway Ca 2+ -ATPase, and the Ca 2+ influx channel Orai1, has previously been shown to contribute to elevated Ca 2+ influx in breast cancer derived cells. In order to investigate the physiological role of this interaction, we examined expression and localization of SPCA2 and Orai1 in mouse lactating mammary glands. We ...
- Handle:
- 10113/57302
- DOI:
- 10.1371/journal.pone.0067348
- PubMed:
- 23840669
- PubMed Central:
- PMC3696057
- https://doi.org/10.1371/journal.pone.0067348
- Author:
- Chika C. Nwugo; Yongping Duan; Hong Lin; Ching-Hong Yang
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- Candidatus Liberibacter asiaticus; Citrus limon; greening disease; leaves; lemons; mass spectrometry; proteins; starch synthase; zinc
- Abstract:
- ... Citrus huanglongbing (HLB) is a highly destructive disease of citrus presumably caused by ‘ Candidatus Liberibacter asiaticus ’ (Las), a gram-negative, insect-transmitted, phloem-limited α-proteobacterium. Although almost all citrus plants are susceptible to HLB, reports have shown reduced susceptibility to Las infection in lemon (Citrus limon) plants. The aim of this study is to identify intra-sp ...
- DOI:
- 10.1371/journal.pone.0067442
- PubMed:
- 23922636
- PubMed Central:
- PMC3686881
- https://doi.org/10.1371/journal.pone.0067442
- Author:
- Robert Scott Cornman; Dawn Lopez; Jay D. Evans; Marinus FW. te. Pas
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- American foul brood; Drosophila; Hymenoptera; Paenibacillus larvae; antimicrobial peptides; bacteria; cytochrome P-450; epithelium; extracellular matrix; gene expression; gene expression regulation; genes; genetic variation; honey bees; immunity; insect larvae; pathogens; peritrophic membrane; proteinase inhibitors; quantitative polymerase chain reaction; serine proteinases; transcription (genetics); virulence
- Abstract:
- ... American foulbrood disease of honey bees is caused by the bacterium Paenibacillus larvae . Infection occurs per os in larvae and systemic infection requires a breaching of the host peritrophic matrix and midgut epithelium. Genetic variation exists for both bacterial virulence and host resistance, and a general immunity is achieved by larvae as they age, the basis of which has not been identified. ...
- DOI:
- 10.1371/journal.pone.0065424
- PubMed:
- 23762370
- PubMed Central:
- PMC3675105
- https://doi.org/10.1371/journal.pone.0065424
- Author:
- Clifford S. Hogan; Beth M. Mole; Sarah R. Grant; David K. Willis; Amy O. Charkowski; Stefan Bereswill
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- plant pathogenic bacteria; cell death; regulator genes; Pectobacterium carotovorum subsp. carotovorum; hosts; Solanum tuberosum; models; plant rots; gene expression; type III secretion system; pathogenesis; protein secretion; leaves
- Abstract:
- ... Pectobacterium species are enterobacterial plant-pathogens that cause soft rot disease in diverse plant species. Unlike hemi-biotrophic plant pathogenic bacteria, the type III secretion system (T3SS) of Pectobacterium carotovorum subsp. carotovorum (P. carotovorum) appears to secrete only one effector protein, DspE. Previously, we found that the T3SS regulator HrpL and the effector DspE are requir ...
- Handle:
- 10113/56862
- DOI:
- 10.1371/journal.pone.0065534
- PubMed:
- 23755246
- PubMed Central:
- PMC3670860
- https://doi.org/10.1371/journal.pone.0065534
- Author:
- Michael B. Cooley; Michele Jay-Russell; Edward R. Atwill; Diana Carychao; Kimberly Nguyen; Beatriz Quiñones; Ronak Patel; Samarpita Walker; Michelle Swimley; Edith Pierre-Jerome; Andrew G. Gordus; Robert E. Mandrell; A. Mark Ibekwe
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- Canis latrans; Escherichia coli O157; Shiga toxin; birds; cattle; deer; elks; enzyme-linked immunosorbent assay; farms; feral animals; genes; green leafy vegetables; hemolysins; intimin; isolation techniques; ranching; sediments; small mammals; surveys; swine; virulence; wildlife; California
- Abstract:
- ... During a 2.5-year survey of 33 farms and ranches in a major leafy greens production region in California, 13,650 produce, soil, livestock, wildlife, and water samples were tested for Shiga toxin (stx)-producing Escherichia coli (STEC). Overall, 357 and 1,912 samples were positive for E. coli O157:H7 (2.6%) or non-O157 STEC (14.0%), respectively. Isolates differentiated by O-typing ELISA and multil ...
- DOI:
- 10.1371/journal.pone.0065716
- PubMed:
- 23762414
- PubMed Central:
- PMC3675059
- https://doi.org/10.1371/journal.pone.0065716
- Author:
- Todd A. Gaines; Alice A. Wright; William T. Molin; Lothar Lorentz; Chance W. Riggins; Patrick J. Tranel; Roland Beffa; Philip Westra; Stephen B. Powles; Jianwei Zhang
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- loci; transposons; DNA; gene amplification; Amaranthus palmeri; 3-phosphoshikimate 1-carboxyvinyltransferase; glyphosate; herbicide resistance; weeds; exons; introns
- Abstract:
- ... Weed populations can have high genetic plasticity and rapid responses to environmental selection pressures. For example, 100-fold amplification of the 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) gene evolved in the weed species Amaranthus palmeri to confer resistance to glyphosate, the world’s most important herbicide. However, the gene amplification mechanism is unknown. We sequenced the ...
- DOI:
- 10.1371/journal.pone.0065819
- PubMed:
- 23762434
- PubMed Central:
- PMC3677901
- https://doi.org/10.1371/journal.pone.0065819
- Author:
- Wen J. Wang; Hong S. He; Martin A. Spetich; Stephen R. Shifley; Frank R. Thompson III; Jacob S. Fraser; Ben Bond-Lamberty
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- Quercus; biomass; clearcutting; decline; forest succession; hardwood forests; landscapes; logging; long term effects; models; risk; species diversity; stand composition; stand structure; tree mortality; trees
- Abstract:
- ... Oak decline is a process induced by complex interactions of predisposing factors, inciting factors, and contributing factors operating at tree, stand, and landscape scales. It has greatly altered species composition and stand structure in affected areas. Thinning, clearcutting, and group selection are widely adopted harvest alternatives for reducing forest vulnerability to oak decline by removing ...
- DOI:
- 10.1371/journal.pone.0066713
- PubMed:
- 23825560
- PubMed Central:
- PMC3688961
- https://doi.org/10.1371/journal.pone.0066713
- Author:
- Ju-Sheng Zheng; Donna K. Arnett; Laurence D. Parnell; Yu-Chi Lee; Yiyi Ma; Caren E. Smith; Kris Richardson; Duo Li; Ingrid B. Borecki; Katherine L. Tucker; José M. Ordovás; Chao-Qiang Lai; Marco Giorgio Baroni
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- alleles; dietary fat; drugs; genetic variation; homeostasis; homozygosity; insulin; insulin resistance; islets of Langerhans; meta-analysis; missense mutation; nutrition-genotype interaction; omega-6 fatty acids; polyunsaturated fatty acids; single nucleotide polymorphism; variance
- Abstract:
- ... Neighboring genes PIK3CA and KCNMB3 are both important for insulin signaling and β-cell function, but their associations with glucose-related traits are unclear. The objective was to examine associations of PIK3CA-KCNMB3 variants with glucose-related traits and potential interaction with dietary fat. We first investigated genetic associations and their modulation by dietary fat in the Genetics of ...
- DOI:
- 10.1371/journal.pone.0067394
- PubMed:
- 23826284
- PubMed Central:
- PMC3694924
- https://doi.org/10.1371/journal.pone.0067394
15. Rift Valley Fever Risk Map Model and Seroprevalence in Selected Wild Ungulates and Camels from Kenya
- Author:
- Seth C. Britch; Yatinder S. Binepal; Mark G. Ruder; Henry M. Kariithi; Kenneth J. Linthicum; Assaf Anyamba; Jennifer L. Small; Compton J. Tucker; Leonard O. Ateya; Abuu A. Oriko; Stephen Gacheru; William C. Wilson; Tetsuro Ikegami
- Source:
- PloS one v.8 no.6 pp. -
- ISSN:
- 1932-6203
- Subject:
- risk; immunoglobulin G; immunoglobulin M; blood serum; humans; camels; seroprevalence; antibodies; epizootic diseases; models; Rift Valley fever; serology; risk assessment; Rift Valley fever phlebovirus; disease outbreaks; environmental indicators; wildlife; prediction; Kenya
- Abstract:
- ... Since the first isolation of Rift Valley fever virus (RVFV) in the 1930s, there have been multiple epizootics and epidemics in animals and humans in sub-Saharan Africa. Prospective climate-based models have recently been developed that flag areas at risk of RVFV transmission in endemic regions based on key environmental indicators that precede Rift Valley fever (RVF) epizootics and epidemics. Alth ...
- DOI:
- 10.1371/journal.pone.0066626
- PubMed:
- 23840512
- PubMed Central:
- PMC3695998
- https://doi.org/10.1371/journal.pone.0066626