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1. Genome-wide identification and characterization of the Dof gene family in cassava (Manihot esculenta)

Author:
Zhu, Jiali,   et al.   ; Zou, Zhi; Zhang, Xicai;     Show all 3 Authors
Source:
Gene 2019 v.687 pp. 298-307
ISSN:
0378-1119
Subject:
Manihot esculenta; cassava; chromosomes; genes; phylogeny; staple crops; tissues; transcription (genetics); transcription factors
Abstract:
... Dof proteins comprise a plant-specific transcription factor family involved in regulation of many plant processes. Despite their diverse roles, little information is available in cassava (Manihot esculenta, Euphorbiaceae), the sixth major staple crop in the world. This study presents the first genome-wide identification of Dof family genes in cassava, resulting in 45 family members that are uneven ...
DOI:
10.1016/j.gene.2018.11.053

2. UDP-Glycosyltransferases are involved in imidacloprid resistance in the Asian citrus psyllid, Diaphorina citri (Hemiptera: Lividae)

Author:
Liu, Jiali,   et al.   ; Tian, Fajun; Wang, Zhengbing; Li, Chaofeng; Zeng, Xinnian;     Show all 5 Authors
Source:
Pesticide biochemistry and physiology 2019 v.154 pp. 23-31
ISSN:
0048-3575
Subject:
Diaphorina citri; RNA interference; at-risk population; biotransformation; gene overexpression; genes; imidacloprid; insecticide resistance; insects; metabolic detoxification; quantitative polymerase chain reaction; toxicity; transcriptome; transferases; xenobiotics
Abstract:
... UDP-glycosyltransferases (UGTs), as phase II detoxification enzymes, are widely distributed within living organisms and play vital roles in the biotransformation of endobiotics and xenobiotics in insects. Insects increase the expression of detoxification enzymes to cope with the stress of xenobiotics, including insecticides. However, the roles of UGTs in insecticide resistance are still seldom rep ...
DOI:
10.1016/j.pestbp.2018.12.010

3. Novel miRNA-based Biomarker Panel for Detection β2-agonists in Goats

Author:
Xue, Jiali,   et al.   ; Zhao, Luyao; Yang, Shuming; You, Xinyong; He, Wenjing;     Show all 5 Authors
Source:
Food chemistry 2019
ISSN:
0308-8146
Subject:
biomarkers; genes; goats; in vitro studies; in vivo studies; microRNA; prediction; quantitative polymerase chain reaction; reverse transcriptase polymerase chain reaction; sequence analysis
Abstract:
... miRNA sequencing was applied in this work to screen miRNA biomarkers related to β2-agonists from the test and control goat samples. A total of 10 selected miRNAs were proven by qRT-PCR to be able to separate treatment cell groups from the control.With previously reported differentially expressed genes (DEGs), we used target gene prediction to build a miRNA-mRNA regulatory network related to β2-ago ...
DOI:
10.1016/j.foodchem.2019.01.193

4. Analysis of metabolic pathways related to fertility restoration and identification of fertility candidate genes associated with Aegilops kotschyi cytoplasm in wheat (Triticum aestivum L.)

Author:
Ye, Jiali,   et al.   ; Li, Sha; Liu, Zihan; Jia, Yulin; Yang, Xuetong; Zhang, Lingli; Song, Xiyue;     Show all 7 Authors
Source:
BMC plant biology 2019 v.19 no.1 pp. 252
ISSN:
1471-2229
Subject:
Aegilops kotschyi; Triticum aestivum; anthers; biochemical pathways; biosynthesis; breeding; carbohydrate metabolism; cytoplasm; factor analysis; flavanone 3-dioxygenase; flavonoids; gene expression regulation; genes; hybrids; male sterility; pectinesterase; polymerase chain reaction; screening; sequence analysis; sugars; thermosensitivity; transcription factors; transcriptomics; wheat
Abstract:
... BACKGROUND: Thermo-sensitive male-sterility based on Aegilops kotschyi cytoplasm (K-TCMS) plays an important role in hybrid wheat breeding. This has important possible applications in two-line hybrid wheat breeding but the genetic basis and molecular regulation mechanism related to fertility restoration are poorly understood. In this study, comparative transcriptome profiling based on RNA sequenci ...
DOI:
10.1186/s12870-019-1824-9
PubMed:
31185903
PubMed Central:
PMC6560861

5. Identification of miRNAs and their target genes in Larix olgensis and verified of differential expression miRNAs

Author:
Zhao, Jiali,   et al.   ; Zhang, Sufang; Yan, Shanshan; Xiong, Huanhuan; An, Peiqi; Wang, Junhui; Zhang, Hanguo; Zhang, Lei;     Show all 8 Authors
Source:
BMC plant biology 2019 v.19 no.1 pp. 247
ISSN:
1471-2229
Subject:
Larix gmelinii var. olgensis; biosynthesis; cellulose synthase; conifers; developmental stages; gene expression; gene expression regulation; gene ontology; genes; high-throughput nucleotide sequencing; leaves; lignification; microRNA; non-coding RNA; plant hormones; prediction; quantitative polymerase chain reaction; reverse transcriptase polymerase chain reaction; roots; signal transduction; stems; tissues
Abstract:
... BACKGROUND: MiRNAs (microRNA) are 18–24 nt endogenous noncoding RNAs that regulate gene expression at the post-transcriptional level, including tissue-specific, developmental timing and evolutionary conservation gene expression. RESULTS: This study used high-throughput sequencing technology for the first time in Larix olgensis, predicted 78 miRNAs, including 12,229,003 reads sRNA, screened differe ...
DOI:
10.1186/s12870-019-1853-4
PubMed:
31185902
PubMed Central:
PMC6558743

6. Immunotoxicity and transcriptome analysis of zebrafish embryos in response to glufosinate-ammonium exposure

Author:
Li, Jiali,   et al.   ; Xiong, Guanghua; Deng, Yunyun; Cao, Zigang; Liao, Xinjun; Liu, Yi; Lu, Huiqiang;     Show all 7 Authors
Source:
Chemosphere 2019 v.236 pp. 124423
ISSN:
0045-6535
Subject:
Danio rerio; abnormal development; antioxidant enzymes; aquatic ecosystems; aquatic organisms; biochemical pathways; catalase; chemokines; cluster analysis; dose response; drugs; embryo (animal); enzyme activity; gene expression; gene expression regulation; genes; glufosinate; immunity; immunotoxicity; macrophages; metabolism; neutrophils; oxidative stress; proteolysis; sequence analysis; superoxide dismutase; surveys; survival rate; transcriptomics
Abstract:
... Glufosinate-ammonium (Gla) is a broad-spectrum and non-selective herbicide that widely used in many countries worldwide, but the biological safety including potentially negative effects on aquatic organisms remains largely unknown. In this study, we investigated the immunotoxic effects of Gla exposure on zebrafish embryos. Firstly, Gla markedly decreased the survival rate and caused a series of mo ...
DOI:
10.1016/j.chemosphere.2019.124423

7. Tomato SlSAP3, a member of the stress‐associated protein family, is a positive regulator of immunity against Pseudomonas syringae pv. tomato DC3000

Author:
Wang, Jiali,   et al.   ; Liu, Shixia; Jiang, Siyu; Wang, Hui; Gao, Yizhou; Zhang, Huijuan; Li, Dayong; Song, Fengming;     Show all 8 Authors
Source:
Molecular plant pathology 2019 v.20 no.6 pp. 815-830
ISSN:
1464-6722
Subject:
Pseudomonas syringae pv. tomato; gene overexpression; genes; genetic markers; immune response; plant stress; proteins; reactive oxygen species; stress response; tomatoes; transgenic plants; zinc finger motif
Abstract:
... Tomato stress‐associated proteins (SAPs) belong to A20/AN1 zinc finger protein family, some of which have been shown to play important roles in plant stress responses. However, little is known about the functions and underlying molecular mechanisms of SAPs in plant immune responses. In the present study, we reported the function of tomato SlSAP3 in immunity to Pseudomonas syringae pv. tomato (Pst) ...
DOI:
10.1111/mpp.12793
PubMed:
30907488
PubMed Central:
PMC6637894

8. Antifungal Activity and Action Mechanism of the Natural Product Cinnamic Acid Against Sclerotinia sclerotiorum

Author:
Wang, Jiali,   et al.   ; Wang, Yong; Sun, Yang; Zhou, Mingxia; Wang, Miaomaio; Feng, Juntao;     Show all 6 Authors
Source:
Plant disease 2019 v.103 no.5 pp. 944-950
ISSN:
0191-2917
Subject:
Sclerotinia sclerotiorum; antifungal properties; carbendazim; chemical residues; cinnamic acid; cross resistance; financial economics; fungicide resistance; fungicides; gene expression; genes; mechanism of action; median effective concentration; membrane permeability; mycelium; oxalic acid; plant pathogenic fungi; sclerotia; stem rot
Abstract:
... Sclerotinia stem rot caused by Sclerotinia sclerotiorum (Lib.) de Bary spreads worldwide and causes serious economic losses. Considering the development of fungicide resistance and chemical residues, it is urgently necessary to explore alternative fungicides. In this study, the activity of the natural product cinnamic acid was assessed. The EC₅₀ values for cinnamic acid inhibition of mycelial grow ...
DOI:
10.1094/PDIS-08-18-1355-RE

9. Amitriptyline plays important roles in modifying the ovarian morphology and improving its functions in rats with estradiol valerate-induced polycystic ovary

Author:
Liu, Jiali,   et al.   ; Li, Xinqiang; Wang, Shufen; Zhang, Li; Zhang, Lei; Luo, Haoshu; Gou, Kemian; Cui, Sheng;     Show all 8 Authors
Source:
Archives of pharmacal research 2019 v.42 no.4 pp. 344-358
ISSN:
0253-6269
Subject:
animal ovaries; beta-2 adrenergic receptors; estradiol; estrous cycle; follicle-stimulating hormone; genes; luteinizing hormone; norepinephrine; polycystic ovary syndrome; progesterone; rats; steroidogenesis; testosterone; women
Abstract:
... Previous studies demonstrated that depression is more prevalent in women with polycystic ovary syndrome (PCOS). In this study, we aimed to determine whether amitriptyline (AMT), an antidepressant drug, plays a role in preventing PCOS. The results showed that AMT modified ovarian morphology improved the ovarian functions and estrus cycle in estradiol valerate (EV)-induced polycystic ovary (PCO). AM ...
DOI:
10.1007/s12272-015-0573-z

10. Novel insights into the evolution of the caveolin superfamily and mechanisms of antiapoptotic effects and cell proliferation in lamprey

Author:
Lu, Jiali,   et al.   ; Teng, Hongming; Wang, Dayu; Zhou, Ying; Pang, Yue; Li, Qingwei;     Show all 6 Authors
Source:
Developmental and comparative immunology 2019
ISSN:
0145-305X
Subject:
Lethenteron camtschaticum; Staphylococcus aureus; Vibrio anguillarum; adenosine triphosphate; adults; apoptosis; carcinogenesis; caspase-3; caspase-9; cell membranes; cell proliferation; cholesterol; endocytosis; evolution; genes; humans; immunohistochemistry; inflammation; intestines; leukocytes; lipopolysaccharides; messenger RNA; mitochondria; neoplasms; oncogene proteins; polyinosinic-polycytidylic acid; protein synthesis; signal transduction; tissues; transport proteins
Abstract:
... Caveolin-1 is the main structural and functional component of caveolin, and it is involved in the regulation of cholesterol transport, endocytosis, and signal transduction. Moreover, changes in caveolin-1 play an important role in tumorigenesis and inflammatory processes. Previous studies have demonstrated that human caveolin-1 is mainly located in the cell membrane and exhibits cell type- and sta ...
DOI:
10.1016/j.dci.2019.01.005

11. The effect of dietary ginseng polysaccharide supplementation on porcine milk‐derived esRNAs involved in the host immune responses

Author:
Xiong, Jiali,   et al.   ; Sun, Jiajie; Yao, Liyuan; Chen, Ting; Luo, Junyi; Xi, Qianyun; Zhang, Yongliang;     Show all 7 Authors
Source:
Journal of animal physiology and animal nutrition 2019 v.103 no.1 pp. 276-282
ISSN:
0931-2439
Subject:
Panax; exosomes; gene expression regulation; genes; immune response; immunomodulation; immunomodulators; microRNA; mothers; polysaccharides; sequence analysis; sows; transcriptomics
Abstract:
... Ginseng polysaccharides (GPS) have been well known as an immune modulator. This study was conducted to investigate the effects of dietary supplemental GPS on the immune responses involved in sow’s milk‐derived exosomal shuttle RNAs (esRNAs) using RNA‐Seq and miRNA‐Seq. Of the 213 identified miRNA types, a total of 26 conserved miRNAs were differently expressed in response to GPS supplementation, i ...
DOI:
10.1111/jpn.12993

12. Methyl jasmonate, salicylic acid and abscisic acid enhance the accumulation of glucosinolates and sulforaphane in radish (Raphanus sativus L.) taproot

Author:
Ying, Jiali,   et al.   ; Chen, Wei; Wang, Yan; Xu, Liang; Dong, Junhui; Zhu, Xianwen; Wang, Qijiao; Fan, Lianxue; Li, Cui; Liu, Liwang;     Show all 10 Authors
Source:
Scientia horticulturae 2019 v.250 pp. 159-167
ISSN:
0304-4238
Subject:
Raphanus sativus; abscisic acid; biosynthesis; enzyme activity; gene expression regulation; genes; glucoraphanin; methyl jasmonate; radishes; salicylic acid; sulforaphane; thioglucosidase; transcription factors; vegetable crops
Abstract:
... Radish is an important root vegetable crop. The effects of environmental stresses on glucosinolate (GLS) contents were extensively investigated in Brassicaceae species. However, little is known about the accumulation of GLS and sulforaphane (SF) in hormone-treated radish taproot. In this study, the effects of methyl jasmonate (MeJA), salicylic acid (SA) and abscisic acid (ABA) on the accumulation ...
DOI:
10.1016/j.scienta.2019.02.024

13. Tomato Stress-Associated Protein 4 Contributes Positively to Immunity Against Necrotrophic Fungus Botrytis cinerea

Author:
Wang, Jiali,   et al.   ; Liu, Shixia; Yuan, Xi; Wang, Yuyan; Wang, Hui; Shen, Zhihui; Gao, Yizhou; Cai, Jiating; Li, Dayong; Song, Fengming;     Show all 10 Authors
Source:
Molecular plant-microbe interactions 2019 v.32 no.5 pp. 566-582
ISSN:
0894-0282
Subject:
Botrytis cinerea; Nicotiana benthamiana; Pseudomonas syringae pv. tomato; ethylene; fungi; gene silencing; genes; hormones; immunity; jasmonic acid; methyl jasmonate; plant stress; proteins; tomatoes; ubiquitination
Abstract:
... Stress-associated proteins (SAPs) are A20 and AN1 domain–containing proteins, some of which play important roles in plant stress signaling. Here, we report the involvement of tomato SlSAP family in immunity. SlSAPs responded with different expression patterns to Botrytis cinerea and defense signaling hormones. Virus-induced gene silencing of each of the SlSAP genes and disease assays revealed that ...
DOI:
10.1094/MPMI-04-18-0097-R

14. Long noncoding RNA Crnde attenuates cardiac fibrosis via Smad3‐Crnde negative feedback in diabetic cardiomyopathy

Author:
Liang, Jiali,   et al.   ; Zheng, Dezhi; Zhang, Yong; Hu, Yonghe; Guan, Jing; Xu, Lianbin; Xiao, Wenjing; Zhong, Qinyue; Ren, Chao; Lu, Jinfeng; Hou, Jun;     Show all 11 Authors
Source:
TheFEBS journal 2019 v.286 no.9 pp. 1645-1655
ISSN:
1742-464X
Subject:
cardiac output; cardiomyopathy; diabetes; fibroblasts; fibrosis; genes; genetic markers; heart; heart failure; humans; in vitro studies; mice; mortality; mothers against decapentaplegic homolog proteins; neoplasms; non-coding RNA; signal transduction; transcriptional activation; transforming growth factor beta
Abstract:
... Diabetic cardiomyopathy (DCM)—ventricular dysfunction in the absence of underlying heart disease—is a common complication of diabetes and a leading cause of mortality associated with the disease. In DCM, cardiac fibrosis is the main cause of heart failure. Although it is well‐established that the transforming growth factor‐beta signaling pathway plays a part in inducing cardiac fibrosis in DCM, de ...
DOI:
10.1111/febs.14780
PubMed:
30748104
PubMed Central:
PMC6849551

15. Monascus yellow, red and orange pigments from red yeast rice ameliorate lipid metabolic disorders and gut microbiota dysbiosis in Wistar rats fed on a high-fat diet

Author:
Hong, Jiali,   et al.   ; ZhouThese authors contributed equally to this study., Wenbin; Guo, Rui; Guo, Weiling; Li, Lu; Ni, Li; Sun, Jinyuan; Liu, Bin; Rao, Pingfan; Lv, Xucong;     Show all 10 Authors
Source:
Food & function 2019 v.10 no.2 pp. 1073-1084
ISSN:
2042-650X
Subject:
Clostridium; Monascus; Ruminococcus albus; animal models; bile acids; blood lipids; blood serum; cholesterol; cholesterol metabolism; dysbiosis; excretion; functional foods; gene expression; genes; high fat diet; homeostasis; hyperlipidemia; ingredients; intestinal microorganisms; laboratory animals; messenger RNA; oral administration; phylotype; pigments; rats; red yeast rice; triacylglycerols
Abstract:
... This study aimed to compare the hypolipidaemic activities of different Monascus pigments (yellow, red and orange pigments) and elucidate their possible regulatory mechanisms on lipid and cholesterol metabolism in rats fed on a high-fat diet (HFD). Results showed that oral administrations of Monascus yellow, red and orange pigments can markedly alleviate the disturbance of lipid metabolism through ...
DOI:
10.1039/c8fo02192a

16. Characterization of Flagellotropic, Chi-Like <i>Salmonella</i> Phages Isolated from Thai Poultry Farms

Author:
Lim, Jiali,   et al.   ; Phothaworn, Preeda; Dunne, Matthew; Supokaivanich, Rattaya; Ong, Catherine; Taharnklaew, Rutjawate; Vesaratchavest, Mongkol; Khumthong, Rabuesak; Pringsulaka, Onanong; Ajawatanawong, Pravech; Klumpp, Jochen; Brown, Nathan; Imam, Mohammed; Clokie, Martha R. J.; Galyov, Edouard E.; Korbsrisate, Sunee;     Show all 16 Authors
Source:
Viruses 2019 v.11 no.6
ISSN:
1999-4915
Subject:
Salmonella Typhimurium; Siphoviridae; coat proteins; farms; flagellum; genes; geographical distribution; lipopolysaccharides; monophyly; nucleotide sequences; phages; polymerase chain reaction; poultry; sequence homology; Korean Peninsula; Thailand
Abstract:
... Despite a wealth of knowledge on Salmonella phages worldwide, little is known about poultry-associated Salmonella phages from Thailand. Here, we isolated 108 phages from Thai poultry farms that infect Salmonella enterica serovar Typhimurium. Phages STm101 and STm118 were identified as temperate Siphoviridae phages. Genome sequencing and analyses revealed these phages share approximately 96% nucleo ...
DOI:
10.3390/v11060520
PubMed:
31195709
PubMed Central:
PMC6631126