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1. A high-resolution whole-genome cattle-human comparative map reveals details of mammalian chromosome evolution

Author:
Everts-van der Wind, A.; Larkin, D.M.; Green, C.A.; Elliott, J.S.; Olmstead, C.A.; Chiu, R.; Schein, J.E.; Marra, M.A.; Womack, J.E.; Lewin, H.A.
Source:
Proceedings of the National Academy of Sciences of the United States of America 2005 v.102 no.51 pp. 18526-18531
ISSN:
0027-8424
Subject:
cattle; humans; chromosome mapping; genome; genomics; genetic markers; bacterial artificial chromosomes; centromeres; telomeres
Abstract:
... Approximately 3,000 cattle bacterial artificial chromosome (BAC)-end sequences were added to the Illinois-Texas 5,000-rad RH (RH, radiation hybrid) map. The BAC-end sequences selected for mapping are approximately equal to 1 Mbp apart on the human chromosomes as determined by blastn analysis. The map has 3,484 ordered markers, of which 3,204 are anchored in the human genome. Two hundred-and-one ho ...
DOI:
10.1073/pnas.0509285102
PubMed:
16339895
PubMed Central:
PMC1317968

2. An Asian origin for a 10,000-year-old domesticated plant in the Americas

Author:
Erickson, D.L.; Smith, B.D.; Clarke, A.C.; Sandweiss, D.H.; Tuross, N.
Source:
Proceedings of the National Academy of Sciences of the United States of America 2005 v.102 no.51 pp. 18315-18320
ISSN:
0027-8424
Subject:
landraces; chloroplast DNA; plant morphology; genotype; provenance; domestication; radiocarbon dating; Lagenaria siceraria; genetic markers; single nucleotide polymorphism; United States; Mexico; Peru
Abstract:
... New genetic and archaeological approaches have substantially improved our understanding of the transition to agriculture, a major turning point in human history that began 10,000-5,000 years ago with the independent domestication of plants and animals in eight world regions. In the Americas, however, understanding the initial domestication of New World species has long been complicated by the earl ...
DOI:
10.1073/pnas.0509279102
PubMed:
16352716
PubMed Central:
PMC1311910

3. Analysis of genomic sequences from peanut (Arachis hypogaea)

Author:
Jayashree B.; Ferguson, M.; Ilut, D.; Doyle, J.; Crouch, J.H.
Source:
Electronic Journal of Biotechnology 2005 v.8 no.3
ISSN:
0717-3458
Subject:
Arabidopsis thaliana; microsatellite repeats; peanuts; sequence alignment; genetic code; genome; Arachis hypogaea; genetic markers

4. AFLP analysis of genetic variability among Stylosanthes guianensis accessions resistant and susceptible to the stylo anthracnose

Author:
Jiang, C.S.; Ma, X.R.; Zhou, D.M.; Zhang, Y.Z.
Source:
Plant breeding 2005 v.124 no.6 pp. 595-598
ISSN:
0179-9541
Subject:
germplasm; Glomerella cingulata; amplified fragment length polymorphism; cluster analysis; forage legumes; Stylosanthes guianensis; genotype; disease resistance; plant pathogenic fungi; plant genetic resources; anthracnose; genetic markers
Abstract:
... Stylosanthes guianensis, belonging to the genus Stylosanthes, is one of the most important tropical forage legumes and is native to South and Central America and Africa. Anthracnose, caused by the fungus Colletotrichum gloeosporioides (Penz.) Sacc., is a major constraint to the extensive use of Stylosanthes as tropical forage. Forty-two accessions of S. guianensis were assessed with amplified frag ...
DOI:
10.1111/j.1439-0523.2005.01168.x

5. Agrobacterium-mediated transformation of the ectomycorrhizal symbiont Laccaria bicolor S238N

Author:
Kemppainen, Minna; Circosta, Ariana; Tagu, Denis; Martin, Francis; Pardo, AlejandroG.
Source:
Mycorrhiza 2005 v.16 no.1 pp. 19-22
ISSN:
0940-6360
Subject:
ectomycorrhizae; genetic transformation; plant breeding; gene transfer; insertional mutagenesis; mycorrhizal fungi; plant nutrition; hygromycin B; antibiotic resistance; Agrobacterium radiobacter; Agaricus bisporus; transgenic plants; transgenes; gene expression; Laccaria bicolor; mycelium; genetic markers; Escherichia coli
Abstract:
... The development of an efficient transformation system is required to alter the expression of symbiosis-regulated genes and to develop insertional mutagenesis in the ectomycorrhizal basidiomycete Laccaria bicolor S238N. Vegetative mycelium of this fungus was transformed by Agrobacterium tumefaciens-mediated gene transfer. The selection marker was the hygromycin resistance gene of Escherichia coli ( ...
DOI:
10.1007/s00572-005-0008-7
PubMed:
16133248

6. Allele-specific CAPS markers based on point mutations in resistance alleles at the pvr1 locus encoding eIF4E in Capsicum

Author:
Yeam, Inhwa; Kang, Byoung-Cheorl; Lindeman, Wouter; Frantz, James D.; Faber, Nanne; Jahn, Molly M.
Source:
Theoretical and applied genetics 2005 v.112 no.1 pp. 178-186
ISSN:
0040-5752
Subject:
Capsicum annuum; hot peppers; Capsicum chinense; genetic markers; alleles; point mutation; loci; single nucleotide polymorphism; disease resistance; Tobacco etch virus; Potato virus Y; Pepper mottle virus
Abstract:
... Marker-assisted selection has been widely implemented in crop breeding and can be especially useful in cases where the traits of interest show recessive or polygenic inheritance and/or are difficult or impossible to select directly. Most indirect selection is based on DNA polymorphism linked to the target trait, resulting in error when the polymorphism recombines away from the mutation responsible ...
DOI:
10.1007/s00122-005-0120-2
PubMed:
16283234

7. Amplified fragment length polymorphism analysis and internal transcribed spacer and coxII sequences reveal a species boundary within Pythium irregulare

Author:
Garzon, C.D.; Geiser, D.M.; Moorman, G.W.
Source:
Phytopathology 2005 v.95 no.12 pp. 1489-1498
ISSN:
0031-949X
Subject:
crops; Pythium irregulare; plant pathogenic fungi; pathogenicity; pathotypes; genetic variation; internal transcribed spacers; amplified fragment length polymorphism; diagnostic techniques; genetic markers; DNA fingerprinting; United States
Abstract:
... Pythium irregulare is a plant-pathogenic oomycete that causes significant damage to a variety of crops, including ornamentals and vegetables. Morphological as well as molecular studies have reported high levels of genetic diversity within P. irregulare sensu lato which has raised the question as to whether it is a single species or is actually a complex of morphologically similar (cryptic) species ...
DOI:
10.1094/PHYTO-95-1489
PubMed:
18943561

8. An alternative to radiation hybrid mapping for large-scale genome analysis in barley

Author:
Masoudi-Nejad, Ali; Nasuda, Shuhei; Bihoreau, Marie-Therese; Waugh, Robbie; Endo, Takashi Ryu
Source:
Molecular genetics and genomics 2005 v.274 no.6 pp. 589-594
ISSN:
1617-4615
Subject:
microsatellite repeats; barley; amplified fragment length polymorphism; intergeneric hybridization; loci; Hordeum vulgare; wheat; chromosome addition; Triticum aestivum; physical chromosome mapping; genetic markers
Abstract:
... The presence of a monosomic gametocidal chromosome (GC) in a barley chromosome addition line of common wheat generates structural aberrations in the barley chromosome as well as in the wheat chromosomes of gametes lacking the GC. A collection of structurally aberrant barley chromosomes is analogous to a panel of radiation hybrid (RH) mapping and is valuable for high-throughput physical mapping. We ...
DOI:
10.1007/s00438-005-0052-1
PubMed:
16231150

9. Analysis of quantitative trait loci associated with leaflet types in two recombinant inbred lines of soybean

Author:
Kim, H.K.; Kang, S.T.; Suh, D.Y.
Source:
Plant breeding 2005 v.124 no.6 pp. 582-589
ISSN:
0179-9541
Subject:
Glycine max; soybeans; leaves; plant morphology; quantitative trait loci; leaf area; dimensions; length; width; microsatellite repeats; genetic markers; agronomic traits; seeds; weight; chromosome mapping
Abstract:
... Leaf area, length and width affect the photosynthetic capability of a plant and so increasing the photosynthetic rate per unit leaf area may improve seed yield in soybean. In this study, simple sequence repeat (SSR) markers were used to identify the genomic regions significantly associated with the quantitative trait locus (QTL) that controls length, width and the length/width ratio of the termina ...
DOI:
10.1111/j.1439-0523.2005.01152.x

10. A QTL for early heading in wheat cultivar Suwon 92

Author:
Xu, X.; Bai, G.; Carver, B.F.; Shaner, G.E.
Source:
Euphytica 2005 v.146 no.3 pp. 233
ISSN:
0014-2336
Subject:
Triticum aestivum; wheat; cultivars; quantitative trait loci; heading; phenology; chromosome mapping; genetic markers; amplified fragment length polymorphism; phenotypic variation
Abstract:
... Heading date is an important trait that determines wheat adaptation to environments. A recombinant inbred line (RIL) population derived from CI 13227 x Suwon 92 was employed to tag the quantitative trait locus (QTL) for early heading in Suwon 92. This population was phenotyped for heading date in 1994, 1995, and 1997, and analyzed with AFLP and SSR markers. Two AFLP markers (XGCTG.CGCT118 and XGCT ...
Handle:
10113/9941
DOI:
10.1007/s10681-005-9017-z

11. Assignment of immune-related genes to the channel catfish, Ictalurus punctatus, genetic map

Author:
Karsi, A.; Wolters, W.R.; Waldbieser, G.C.
Source:
Animal genetics 2005 v.36 no.6 pp. 502
ISSN:
0268-9146
Subject:
Ictalurus punctatus; freshwater fish; chromosome mapping; genes; immune system; linkage (genetics); microsatellite repeats; genetic markers; genetic polymorphism; nucleotide sequences
Abstract:
... Eighteen new genes, adenosine A1 receptor (ADORA1), complement component 4-beta (C4b), complement component 8-beta (C8b), chemokine ligand 19 (CCL19), chemokine ligand 21 (CCL21), chemokine ligand 25 (CCL25), chemokine receptor 2 (CCR2), chemokine receptor 5 (CCR5), chemokine receptor 4 (CCR4), chemokine receptor 7 (CCR7), chemokine receptor 9 (CCR9), interleukin 1-beta (IL1B), integrin II-beta (I ...
Handle:
10113/8575
PubMed:
16293124

12. Cell lines and plants obtained after protoplast fusions of Rosa+Rosa, Rosa+Prunus and Rosa+Rubus

Author:
Squirrell, J.; Mandegaran, Z.; Yokoya, K.; Roberts, A.V.; Mottley, J.
Source:
Euphytica 2005 v.146 no.3 pp. 223-231
ISSN:
0014-2336
Subject:
Prunus avium; protoplasts; cultivars; plant breeding; protoplast fusion; random amplified polymorphic DNA technique; intergeneric hybridization; karyotyping; Rubus; Prunus pseudocerasus; plant morphology; callus culture; in vitro regeneration; genetic markers; Rosa
Abstract:
... Protoplasts of three Rosa cultivars were fused with each other, with protoplasts of Prunus `Colt' and with protoplasts of Rubus laciniatus, using polyethylene glycol 4000 as a fusogen. Protoplasts of Prunus were incapable of cell division and those of Rosa and Rubus were disabled by treatments with metabolic inhibitors, either iodoacetate (IOA) or rhodamine 6-G (R6G). Parental protoplasts were the ...
DOI:
10.1007/s10681-005-9011-5

13. Characterization and evaluation of microsatellite loci in European hazelnut (Corylus avellana L.) and their transferability to other Corylus species

Author:
Boccacci, P.; Akkak, A.; Bassil, N.V.; Mehlenbacher, S.A.; Botta, R.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 934
ISSN:
1471-8278
Subject:
Corylus avellana; Corylus; hazelnuts; microsatellite repeats; genetic markers; loci; nucleotide sequences; polymerase chain reaction; DNA primers; heterozygosity; alleles
Abstract:
... In this work, 18 microsatellite loci were developed in the European hazelnut (Corylus avellana L.) using three enriched genomic libraries. They were evaluated on a set of 20 accessions of this species on the basis of number of alleles (mean: 7.1), expected heterozygosity (mean: 0.67), power of discrimination (mean: 0.77) and polymorphism information content (mean: 0.64). Cross-species transferabil ...
Handle:
10113/8110
DOI:
10.1111/j.1471-8286.2005.01121.x

14. Characterization of eight microsatellite loci in the maize stalk borer Busseola fusca Fuller, 1901 (Lepidoptera: Noctuidae)

Author:
Faure, N.; Silvain, J.F.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 846-848
ISSN:
1471-8278
Subject:
microsatellite repeats; insect pests; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; Busseola fusca; genetic polymorphism; genetic markers; Sub-Saharan Africa
DOI:
10.1111/j.1471-8286.2005.01084.x

15. Characterization of eight polymorphic microsatellites in endangered willow Salix hukaoana

Author:
Kikuchi, S.; Suzuki, W.; Ban, N.; Kanazashi, A.; Yoshimaru, H.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 869-870
ISSN:
1471-8278
Subject:
microsatellite repeats; endangered species; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; Salix; genetic markers; Japan
DOI:
10.1111/j.1471-8286.2005.01098.x

16. Characterization of newly developed microsatellite loci in the stemmed yellow violet, Viola pubescens (Violaceae)

Author:
Culley, T.M.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 882-884
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; genetic markers; Viola
DOI:
10.1111/j.1471-8286.2005.01096.x

17. Characterization of phosphoinositide-3-kinase, class 3 (PIK3C3) gene and association tests with quantitative traits in pigs

Author:
Kim, J.H.; Choi, B.H.; Lim, H.T.; Park, E.W.; Lee, S.H.; Seo, B.Y.; Cho, I.C.; Lee, J.G.; Oh, S.J.; Jeon, J.T.
Source:
Asian-Australas. j. anim. sci 2005 v.18 no.12 pp. 1701-1707
ISSN:
1011-2367
Subject:
animal growth; swine; genetic markers; backfat; single nucleotide polymorphism; South Korea
DOI:
10.5713/ajas.2005.1701

18. Characterization of seven polymorphic microsatellites for the study of two Ranunculaceae: Ranunculus nodiflorus L., a rare endangered species and Ranunculus flammula L., a common closely related species

Author:
Noel, F.; Boisselier-Dubayle, M.C.; Lambourdiere, J.; Machon, N.; Moret, J.; Samadi, S.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 827-829
ISSN:
1471-8278
Subject:
microsatellite repeats; endangered species; alleles; loci; Ranunculus; DNA primers; polymerase chain reaction; heterozygosity; genetic markers; France
DOI:
10.1111/j.1471-8286.2005.01077.x

19. Characterization of six microsatellite DNA loci for Sorex arizonae

Author:
Ortega, J.; Young, S.; Simons, L.H.; Maldonado, J.E.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 851-853
ISSN:
1471-8278
Subject:
microsatellite repeats; endangered species; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; Sorex; genetic markers; Arizona; New Mexico
DOI:
10.1111/j.1471-8286.2005.01086.x

20. Characterization of six microsatellite loci in the African wild silk moth (Gonometa postica, Lasiocampidae)

Author:
Delport, W.; Ferguson, J.W.; Bloomer, P.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 860-862
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; Lasiocampidae; DNA primers; polymerase chain reaction; heterozygosity; genetic markers
DOI:
10.1111/j.1471-8286.2005.01089.x

21. Chloroplast microsatellites in Prunus, Rosaceae

Author:
Ohta, S.; Nishitani, C.; Yamamoto, T.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 837-840
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; DNA primers; chloroplast DNA; polymerase chain reaction; heterozygosity; Prunus salicina; genetic markers
DOI:
10.1111/j.1471-8286.2005.01080.x

22. Conservation and versatility of a new set of primers for long-PCR amplification of complete insect mitochondrial genomes based on Haematobia irritans mtDNA sequences

Author:
Barau, J.G.; Azeredo-Espin, A.M.L. de; Lessinger, A.C.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 885-887
ISSN:
1471-8278
Subject:
microsatellite repeats; insect pests; alleles; loci; mitochondrial DNA; DNA primers; polymerase chain reaction; heterozygosity; Haematobia irritans; genetic markers
DOI:
10.1111/j.1471-8286.2005.01103.x

23. Cross-species amplification of microsatellite loci within the dioecious, polyploid genus Actinidia (Actinidiaceae)

Author:
Fraser, L.G.; McNeilage, M.A.; Tsang, G.K.; Harvey, C.F.; De Silva, H. N.
Source:
Theoretical and applied genetics 2005 v.112 no.1 pp. 149
ISSN:
0040-5752
Subject:
microsatellite repeats; DNA libraries; loci; polymerase chain reaction; expressed sequence tags; kiwifruit; Actinidia deliciosa; Actinidia chinensis; genetic markers
Abstract:
... Microsatellite marker transfer across species in the dioecious genus Actinidia (kiwifruit) could offer an efficient and time-effective technique for use during trait transfer for vine and fruit improvement in breeding programmes. We evaluated the cross-species amplification of 20 EST-derived microsatellite markers that were fully informative in an Actinidia chinensis mapping family. We tested all ...
DOI:
10.1007/s00122-005-0117-x
PubMed:
16211378

24. Detection of farm fox and hybrid genotypes among wild arctic foxes in Scandinavia

Author:
Norén, Karin; Dalén, Love; Kvaløy, Kirsti; Angerbjörn, Anders
Source:
Conservation genetics 2005 v.6 no.6 pp. 885-894
ISSN:
1566-0621
Subject:
Markov chain; Monte Carlo method; farms; foxes; genetic markers; genotyping; haplotypes; hybridization; hybrids; microsatellite repeats; restriction fragment length polymorphism; Scandinavia
Abstract:
... In Scandinavia, farmed arctic foxes frequently escape from farms, raising concern about hybridization with the endangered wild population. This study was performed to find a genetic marker to distinguish escaped farm foxes from wild Scandinavian foxes. Microsatellite and mitochondrial control region variation were analyzed in 41 farm foxes. The results were compared with mitochondrial and microsat ...
DOI:
10.1007/s10592-005-9075-8

25. Detection of Genetic Markers of Fecal Indicator Bacteria in Lake Michigan and Determination of Their Relationship to Escherichia coli Densities Using Standard Microbiological Methods

Author:
Bower, Patricia A.; Scopel, Caitlin O.; Jensen, Erika T.; Depas, Morgan M.; McLellan, Sandra L.
Source:
Applied and environmental microbiology 2005 v.71 no.12 pp. 8305-8313
ISSN:
0099-2240
Subject:
Bacteroides; Escherichia coli; agricultural runoff; beaches; detection limit; genetic markers; indicator species; pollution; polymerase chain reaction; rain; rivers; sewage; sewage treatment; stormwater; summer; surface water; urban areas; wastewater treatment; Lake Michigan
Abstract:
... Lake Michigan surface waters impacted by fecal pollution were assessed to determine the occurrence of genetic markers for Bacteroides and Escherichia coli. Initial experiments with sewage treatment plant influent demonstrated that total Bacteroides spp. could be detected by PCR in a 25- to 125-fold-higher dilution series than E. coli and human-specific Bacteroides spp., which were both found in si ...
DOI:
10.1128/AEM.71.12.8305-8313.2005
PubMed:
16332817
PubMed Central:
PMC1317319

26. Development and characterization of microsatellite markers in a clonal plant, Dioscorea japonica Thunb

Author:
Mizuki, I.; Tani, N.; Ishida, K.; Tsumura, Y.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 721-723
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; Dioscorea; genetic markers
DOI:
10.1111/j.1471-8286.2005.01020.x

27. Development and characterization of microsatellite markers in Tectona grandis (Linn. f)

Author:
Verhaegen, D.; Ofori, D.; Fofana, I.; Poitel, M.; Vaillant, A.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 945-947
ISSN:
1471-8278
Subject:
microsatellite repeats; forest trees; loci; alleles; DNA primers; polymerase chain reaction; genetic variation; heterozygosity; Tectona grandis; genetic markers
DOI:
10.1111/j.1471-8286.2005.01124.x

28. Development and mapping of a public reference set of SSR markers in Lolium perenne L

Author:
Jensen, L.B.; Muylle, H.; Arens, P.; Andersen, C.H.; Holm, P.B.; Ghesquiere, M.; Julier, B.; Lubberstedt, T.; Nielsen, K.K.; Riek, J. de
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 951-957
ISSN:
1471-8278
Subject:
microsatellite repeats; loci; DNA primers; Lolium perenne; polymerase chain reaction; linkage groups; chromosome mapping; genetic markers
DOI:
10.1111/j.1471-8286.2005.01043.x

29. Development of microsatellite markers for mango (Mangifera indica L.)

Author:
Duval, M.F.; Bunel, J.; Sitbon, C.; Risterucci, A.M.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 824-826
ISSN:
1471-8278
Subject:
cultivars; Mangifera indica; microsatellite repeats; alleles; loci; mangoes; DNA primers; polymerase chain reaction; heterozygosity; genetic markers; Guadeloupe
DOI:
10.1111/j.1471-8286.2005.01076.x

30. Development of microsatellite markers in Abies nordmanniana (Stev.) Spach and cross-species amplification in the Abies genus

Author:
Hansen, O.K.; Vendramin, G.G.; Sebastiani, F.; Edwards, K.J.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 784-787
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; Abies nordmanniana; inheritance (genetics); genetic markers; Republic of Georgia; Russia; Turkey (country)
DOI:
10.1111/j.1471-8286.2005.01062.x

31. Development of molecular markers for crown rot resistance in wheat: mapping of QTLs for seedling resistance in a '2-49' x 'Janz' population

Author:
Collard, B.C.Y.; Grams, R.A.; Bovill, W.D.; Percy, C.D.; Jolley, R.; Lehmensiek, A.; Wildermuth, G.; Sutherland, M.W.
Source:
Plant breeding 2005 v.124 no.6 pp. 532-537
ISSN:
0179-9541
Subject:
Triticum aestivum; wheat; disease resistance; Fusarium pseudograminearum; plant pathogenic fungi; crown rot; quantitative trait loci; chromosome mapping; genetic markers; inheritance (genetics); phenotypic variation; alleles; seedlings
Abstract:
... Crown rot, caused by Fusarium pseudograminearum, is an important disease of wheat in Australia and elsewhere. In order to identify molecular markers associated with partial seedling resistance to this disease, bulked segregant analysis and quantitative trait loci (QTL) mapping approaches were undertaken using a population of 145 doubled haploid lines constructed from '2-49' (partially resistant) x ...
DOI:
10.1111/j.1439-0523.2005.01163.x

32. Development of new polymorphic microsatellite markers for the New World screw-worm Cochliomyia hominivorax (Diptera: Calliphoridae)

Author:
Torres, T.T.; Azeredo-Espin, A.M.L. de
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 815-817
ISSN:
1471-8278
Subject:
microsatellite repeats; Cochliomyia hominivorax; insect pests; loci; alleles; DNA primers; polymerase chain reaction; heterozygosity; genetic markers
DOI:
10.1111/j.1471-8286.2005.01073.x

33. Development of polymorphic markers for Cirsium arvense, Canada thistle, and their amplification in closely related taxa

Author:
Slotta, T.A.B.; Foley, M.E.; Horvath, D.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 917-919
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; Cirsium arvense; weeds; genetic markers
DOI:
10.1111/j.1471-8286.2005.01112.x

34. Development of polymorphic microsatellite markers in sesame (Sesamum indicum L.)

Author:
Dixit, A.; Jin, M.H.; Chung, J.W.; Yu, J.W.; Chung, H.K.; Ma, K.H.; Park, Y.J.; Cho, E.G.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 736-738
ISSN:
1471-8278
Subject:
microsatellite repeats; Sesamum indicum; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; genetic markers
DOI:
10.1111/j.1471-8286.2005.01048.x

35. Development of STMS markers from the medicinal plant Madagascar periwinkle [Catharanthus roseus (L.) G. Don.]

Author:
Shokeen, B.; Sethy, N.K.; Choudhary, S.; Bhatia, S.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 818-820
ISSN:
1471-8278
Subject:
microsatellite repeats; Catharanthus roseus; alleles; loci; DNA primers; polymerase chain reaction; medicinal plants; heterozygosity; genetic markers
DOI:
10.1111/j.1471-8286.2005.01074.x

36. Distinguishing adaptive from nonadaptive genetic differentiation: comparison of Q(ST) and F(ST) at two spatial scales

Author:
Volis, S.; Yakubov, B.; Shulgina, I.; Ward, D.; Mendlinger, S.
Source:
Heredity 2005 v.95 no.6 pp. 466-476
ISSN:
0018-067X
Subject:
random amplified polymorphic DNA technique; plant development; loci; Hordeum vulgare subsp. spontaneum; population genetics; genetic variation; allozymes; genetic markers; quantitative traits; Israel
Abstract:
... Genetic differentiation in 20 hierarchically sampled populations of wild barley was analyzed with quantitative traits, allozymes and Random Amplified Polymorphic DNAs (RAPDs), and compared for three marker types at two hierarchical levels. Regional subdivision for both molecular markers was much lower than for quantitative traits. For both allozymes and RAPDs, most loci exhibited minor or no regio ...
DOI:
10.1038/sj.hdy.6800745
PubMed:
16189543

37. Diversity and host association of the tropical tree endophyte Lasiodiplodia theobromae revealed using simple sequence repeat markers

Author:
Mohali, S.; Burgess, T.I.; Wingfield, M.J.
Source:
Forest pathology 2005 v.35 no.6 pp. 385-396
ISSN:
1437-4781
Subject:
endophytes; host range; microsatellite repeats; forest trees; alleles; fungal diseases of plants; tropical forests; Botryodiplodia theobromae; strain differences; geographical variation; gene flow; plant pathogenic fungi; genetic variation; genetic markers; Venezuela; Mexico; South Africa
DOI:
10.1111/j.1439-0329.2005.00418.x

38. Eleven new highly polymorphic microsatellite loci in the yellow croaker, Pseudosciaena crocea

Author:
An, H.S.; Cho, K.C.; Park, J.Y.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 866-868
ISSN:
1471-8278
Subject:
marine fish; microsatellite repeats; Sciaenidae; loci; alleles; DNA primers; polymerase chain reaction; heterozygosity; genetic markers
DOI:
10.1111/j.1471-8286.2005.01097.x

39. Extension and use of a physical map of the Thinopyrum-derived Lr19 translocation

Author:
Groenewald, J. Z.; Fourie, M.; Marais, A. S.; Marais, G. F.
Source:
Theoretical and applied genetics 2005 v.112 no.1 pp. 131-138
ISSN:
0040-5752
Subject:
restriction fragment length polymorphism; rust diseases; Elytrigia; microsatellite repeats; amplified fragment length polymorphism; wheat; Triticum aestivum; mutants; genes; disease resistance; chromosome translocation; physical chromosome mapping; genetic markers; genetic recombination
Abstract:
... Twenty-nine deletion mutant lines were used to extend a physical map of the Lr19 translocated chromosome segment. One hundred and forty-four Sse8387I/MseI and 32 EcoRI/MseI primer combinations were used to obtain 95 Thinopyrum-specific AFLP markers. The physical map confirmed that terminal deletions had mostly occurred, however, it appears that intercalary deletions and primer or restriction site ...
DOI:
10.1007/s00122-005-0113-1
PubMed:
16228191

40. Fingerprinting temperate japonica and tropical indica rice genotypes by comparative analysis of DNA markers

Author:
Jeung, J.U.; Hwang, H.G.; Moon, H.P.; Jena, K.K.
Source:
Euphytica 2005 v.146 no.3 pp. 239-251
ISSN:
0014-2336
Subject:
Oryza sativa; rice; cultivars; temperate zones; tropics; genotype; DNA fingerprinting; genetic markers; random amplified polymorphic DNA technique; amplified fragment length polymorphism; breeding lines; isogenic lines
Abstract:
... This paper describes the relative efficiency of three marker systems, RAPD, ISSR, and AFLP, in terms of fingerprinting 14 rice genotypes consisting of seven temperatejaponica rice cultivars, three indica near-isogenic lines, three indica introgression lines, and one breeding line of japonica type adapted to high-altitude areas of the tropics with cold tolerance genes. Fourteen RAPD, 21 ISSR, and 8 ...
DOI:
10.1007/s10681-005-9022-2

41. Gene flow and hybridisation in a mixed oak forest (Quercus pyrenaica Willd. and Quercus petraea (Matts.) Liebl.) in central Spain

Author:
Valbuena-Carabana, M.; Gonzalez-Martinez, S.C.; Sork, V.L.; Collada, C.; Soto, A.; Goicoechea, P.G.; Gil, L.
Source:
Heredity 2005 v.95 no.6 pp. 457-465
ISSN:
0018-067X
Subject:
Quercus pyrenaica; Quercus petraea; gene flow; interspecific hybridization; mixed forests; introgression; microsatellite repeats; genetic markers; forest genetics; hybrids; gene frequency; alleles; Spain
Abstract:
... Oaks are long-standing models for the study of gene flow and hybridisation. Temperate (Quercus petraea) and sub-Mediterranean (Quercus pyrenaica) oaks coexist in central Spain, showing remarkable differences in population size and structure. Q. petraea has a scattered distribution in central Spain, where it is at one of the southernmost limits of its range, and forms low-density stands; in contras ...
DOI:
10.1038/sj.hdy.6800752
PubMed:
16249802

42. Gene flow and mating system in five Cryptomeria japonica D. Don seed orchards as revealed by analysis of microsatellite markers

Author:
Moriguchi, Yoshinari; Tani, Naoki; Itoo, Sinji; Kanehira, Fuminori; Tanaka, Kouji; Yomogida, Hidetoshi; Taira, Hideaki; Tsumura, Yoshihiko
Source:
Tree genetics & genomes 2005 v.1 no.4 pp. 174-183
ISSN:
1614-2942
Subject:
Cryptomeria japonica; clones; fecundity; flowering; forests; gene flow; genetic markers; gibberellins; mating systems; phenology; pollen; seed orchards; seed quality; selfing
Abstract:
... We investigated gene flow in five Cryptomeria japonica D. Don seed orchards of two different types (common and miniature) at widely spaced locations using microsatellite markers. The quality of a seed crop is determined by many factors, including pollen contamination from outside sources, self-fertilization, and the proportion of contributions from constituent clones. Contamination rates were foun ...
DOI:
10.1007/s11295-005-0023-z

43. GENER: a server-based analysis of pollen pool structure

Author:
Dyer, R.J.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 971-973
ISSN:
1471-8278
Subject:
plant genetics; pollen flow; computer analysis; gene flow; pollen; computer software; genetic variance; genetic markers
DOI:
10.1111/j.1471-8286.2005.01113.x

44. Genetic consequence of restricted habitat and population decline in endangered Isoetes sinensis (Isoetaceae)

Author:
Kang, M.; Ye, Q.; Huang, H.
Source:
Annals of botany 2005 v.96 no.7 pp. 1265-1274
ISSN:
0305-7364
Subject:
wetlands; endangered species; amplified fragment length polymorphism; geographical variation; population structure; genetic distance; Isoetes; nucleotide sequences; genetic variation; plant ecology; germplasm conservation; habitats; aquatic plants; genetic markers; China
Abstract:
... BACKGROUND AND AIMS: Isoetes sinensis (Isoeteaceae) is a critically endangered aquatic quillwort in eastern China. Rapid decline of extant population size and local population extinction have occurred in recent years and have raised great concerns among conservationists. METHODS: Amplified fragment length polymorphisms (AFLPs) were used to investigate the genetic variation and population structure ...
DOI:
10.1093/aob/mci277
PubMed:
16216819
PubMed Central:
PMC4247076

45. Genetic diversity and species identification in the endangered white abalone(Haliotis sorenseni)

Author:
Gruenthal, K.M.; Burton, R.S.
Source:
Conservation genetics 2005 v.6 no.6 pp. 929-939
ISSN:
1566-0621
Subject:
DNA; Haliotis sorenseni; Mendelian inheritance; abalone; adults; breeding stock; crossing; dredging; endangered species; genes; genetic markers; genetic variation; genotype; interspecific variation; microsatellite repeats; rearing; sequence analysis; species diversity; species identification; United States
Abstract:
... In 2001, the white abalone Haliotis sorenseni became the first marine invertebrate in United States waters to receive federal protection as an endangered species. Prior to the endangered species listing, 20 abalone were collected as potential broodstock for a captive rearing program. Using DNA from these animals, we have developed genetic markers, including five nuclear microsatellite loci and par ...
DOI:
10.1007/s10592-005-9079-4

46. Genetic diversity of herbicide-resistant and -susceptible Avena fatua populations in North Dakota and Minnesota

Author:
Mengistu, L.W.; Messersmith, C.G.; Christoffers, M.J.
Source:
Weed research 2005 v.45 no.6 pp. 413-423
ISSN:
0043-1737
Subject:
Avena fatua; microsatellite repeats; random amplified polymorphic DNA technique; herbicide-resistant weeds; gene flow; genetic variation; genetic markers; North Dakota; Minnesota
DOI:
10.1111/j.1365-3180.2005.00473.x

47. Genetic fingerprinting of germplasm accessions as an aid for species conservation: a case study with Borderea chouardii (Dioscoreaceae), one of the most critically endangered Iberian plants

Author:
Segarra-Moragues, J.G.; Iriondo, J.M.; Catalan, P.
Source:
Annals of botany 2005 v.96 no.7 pp. 1283-1292
ISSN:
0305-7364
Subject:
Dioscoreaceae; endangered species; germplasm conservation; germplasm evaluation; provenance; DNA fingerprinting; genetic markers; genetic variation; population genetics; genetic relationships; microsatellite repeats; Spain
Abstract:
... BACKGROUND AND AIMS: Molecular markers have changed previous expectations about germplasm collections of endangered plants, as new perspectives aim at holding a significant representation of all the genetic diversity in the studied species to accomplish further conservation initiatives successfully. Borderea chouardii is a critically endangered allotetraploid dioecious member of Dioscoreaceae, kno ...
DOI:
10.1093/aob/mci280
PubMed:
16230324
PubMed Central:
PMC4247079

48. Genetic relationships among South-East Turkey wild barley populations and sampling strategies of Hordeum spontaneum

Author:
Ozkan, Hakan; Kafkas, Salih; Sertac Ozer, M.; Brandolini, Andrea
Source:
Theoretical and applied genetics 2005 v.112 no.1 pp. 12-20
ISSN:
0040-5752
Subject:
amplified fragment length polymorphism; genetic distance; Hordeum vulgare subsp. spontaneum; genotype; genetic variation; wild relatives; genetic polymorphism; genetic markers; Turkey (country)
Abstract:
... To assess the genetic diversity and the genetic structure of Turkish wild barley (Hordeum spontaneum Tell.) populations, 76 genotypes from ten ecologically and geographically different locations were analyzed by means of amplified fragment length polymorphism (AFLP) markers. Five primer combinations produced 187 scorable bands, of which 117 (62.6%) were polymorphic. Several population-specific and ...
DOI:
10.1007/s00122-005-0067-3
PubMed:
16283231

49. Genetic Similarity of Flag Shoot and Ascospore Subpopulations of Erysiphe necator in Italy

Author:
Cortesi, Paolo; Mazzoleni, Anna; Pizzatti, Cristina; Milgroom, Michael G.
Source:
Applied and environmental microbiology 2005 v.71 no.12 pp. 7788-7791
ISSN:
0099-2240
Subject:
Erysiphe; Uncinula necator; plant pathogenic fungi; overwintering; buds; ascospores; genetic markers; genes; genetic polymorphism; vineyards; Vitis vinifera; powdery mildew; epidemiology; wine grapes; Italy
Abstract:
... The overwintering mode of the grape powdery mildew fungus, Erysiphe necator (syn. Uncinula necator), as mycelium in dormant buds (resulting in symptoms known as flag shoots) or as ascospores in cleistothecia, affects the temporal dynamics of epidemics early in the growing season. We tested whether distinct genetic groups (I and III) identified previously in E. necator correlate to overwintering mo ...
DOI:
10.1128/AEM.71.12.7788-7791.2005
PubMed:
16332752
PubMed Central:
PMC1317322

50. Genetic variation and relationships among Ulex (Fabaceae) species in southern Spain and northern Morocco assessed by chloroplast microsatellite (cpSSR) markers

Author:
Cubas, Paloma; Pardo, Cristina; Tahiri, Hikmat
Source:
American journal of botany 2005 v.92 no.12 pp. 2031-2043
ISSN:
0002-9122
Subject:
Ulex; chloroplast DNA; microsatellite repeats; molecular systematics; genetic variation; population genetics; haplotypes; phylogeny; polyploidy; interspecific hybridization; genetic markers; Spain; Morocco
Abstract:
... Genetic variation in 27 populations of Ulex species from southern Spain and northern Morocco (Betic-Rif arc) was assessed using 11 chloroplast microsatellite (cpSSR) markers, which revealed 47 different haplotypes. These nonrecombinant, haploid markers allow measurement of genetic variation in closely related species of Ulex where molecular phylogenetic analyses have not provided a clear view of i ...
DOI:
10.3732/ajb.92.12.2031
PubMed:
21646121

51. Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress

Author:
Rostoks, N.; Mudie, S.; Cardle, L.; Russell, J.; Ramsay, L.; Booth, A.; Svensson, J.T.; Wanamaker, S.I.; Walia, H.; Rodriguez, E.M.
Source:
Molecular genetics and genomics 2005 v.274 no.5 pp. 515-527
ISSN:
1617-4615
Subject:
Hordeum vulgare; barley; genomics; genome; single nucleotide polymorphism; haplotypes; chromosome mapping; genetic markers; restriction fragment length polymorphism; amplified fragment length polymorphism; microsatellite repeats; quantitative trait loci; stress tolerance; nitrate nitrogen; nutrient deficiencies; salt tolerance; flooded conditions
Abstract:
... More than 2,000 genome-wide barley single nucleotide polymorphisms (SNPs) were developed by resequencing unigene fragments from eight diverse accessions. The average genome-wide SNP frequency observed in 877 unigenes was 1 SNP per 200 bp. However, SNP frequency was highly variable with the least number of SNP and SNP haplotypes observed within European cultivated germplasm reflecting effects of br ...
DOI:
10.1007/s00438-005-0046-z
PubMed:
16244872

52. Habitat fragmentation affects culture transmission: patterns of song matching in Dupont's lark

Author:
LAIOLO, PAOLA; TELLA, JOSÉ L.
Source:
Journal of applied ecology 2005 v.42 no.6 pp. 1183-1193
ISSN:
0021-8901
Subject:
acoustics; animal communication; autocorrelation; birds; breeding season; communications technology; genetic markers; habitat fragmentation; habitats; males
Abstract:
... 1 Males of many bird species match song with neighbours during territorial interactions. Although bird vocal mimicry has received much attention, the relationships between song variation and ecological factors such as landscape geometry and habitat fragmentation are still poorly known, and most previous research has been limited to one or a few populations of a species. In this study we analysed t ...
DOI:
10.1111/j.1365-2664.2005.01093.x

53. High-resolution mapping and mutation analysis separate the rust resistance genes Sr31, Lr26 and Yr9 on the short arm of rye chromosome 1

Author:
Mago, R.; Miah, H.; Lawrence, G.J.; Wellings, C.R.; Spielmeyer, W.; Bariana, H.S.; McIntosh, R.A.; Pryor, A.J.; Ellis, J.G.
Source:
Theoretical and applied genetics 2005 v.112 no.1 pp. 41-50
ISSN:
0040-5752
Subject:
restriction fragment length polymorphism; rust diseases; amplified fragment length polymorphism; phenotype; stems; gene segregation; Puccinia graminis; Secale cereale; rye; chromosome mapping; genes; disease resistance; mutants; genetic markers; linkage (genetics); Puccinia recondita; Puccinia striiformis; leaves
Abstract:
... The stem, leaf and stripe rust resistance genes Sr31, Lr26 and Yr9, located on the short arm of rye chromosome 1, have been widely used in wheat by means of wheat-rye translocation chromosomes. Previous studies have suggested that these resistance specificities are encoded by either closely-linked genes, or by a single gene capable of recognizing all three rust species. To investigate these issues ...
DOI:
10.1007/s00122-005-0098-9
PubMed:
16283230

54. High-resolution mapping, cloning and molecular characterization of the Pi-k h gene of rice, which confers resistance to Magnaporthe grisea

Author:
Sharma, T. R.; Madhav, M. S.; Singh, B. K.; Shanker, P.; Jana, T. K.; Dalal, V.; Pandit, A.; Singh, A.; Gaikwad, K.; Upreti, H. C.; Singh, N. K.
Source:
Molecular genetics and genomics 2005 v.274 no.6 pp. 569-578
ISSN:
1617-4615
Subject:
rice; blast disease; microsatellite repeats; messenger RNA; Oryza sativa; gene expression; genes; disease resistance; Magnaporthe grisea; physical chromosome mapping; genetic markers
Abstract:
... In order to understand the molecular mechanisms involved in the gene-for-gene type of pathogen resistance, high-resolution genetic and physical mapping of resistance loci is required to facilitate map-based cloning of resistance genes. Here, we report the molecular mapping and cloning of a dominant gene (Pi-k ʰ) present in the rice line Tetep, which is associated with resistance to rice blast dise ...
DOI:
10.1007/s00438-005-0035-2
PubMed:
16228246

55. High-temperature adult-plant (HTAP) stripe rust resistance gene Yr36 from Triticum turgidum ssp. dicoccoides is closely linked to the grain protein content locus Gpc-B1

Author:
Uauy, Cristobal; Brevis, Juan Carlos; Chen, Xianming; Khan, Imtiaz; Jackson, Lee; Chicaiza, Oswaldo; Distelfeld, Assaf; Fahima, Tzion; Dubcovsky, Jorge
Source:
Theoretical and applied genetics 2005 v.112 no.1 pp. 97
ISSN:
0040-5752
Subject:
Triticum turgidum subsp. dicoccoides; mature plants; disease resistance; rust diseases; Puccinia striiformis; air temperature; genes; chromosome mapping; linkage (genetics); quantitative trait loci; protein content; agronomic traits; genetic markers; restriction fragment length polymorphism
Abstract:
... Several new races of the stripe rust pathogen have become frequent throughout the wheat growing regions of the United States since 2000. These new races are virulent to most of the wheat seedling resistance genes limiting the resistance sources that can be used to combat this pathogen. High-temperature adult-plant (HTAP) stripe rust resistance has proven to be more durable than seedling resistance ...
Handle:
10113/6034
DOI:
10.1007/s00122-005-0109-x
PubMed:
16208504

56. Identification of RAPD markers and development of SCAR markers linked to a powdery mildew resistance gene, and their location on chromosome in wheat cultivar brock

Author:
Wang, Z.; Zhao, P.; Chen, H.; Peng, Y.; Xie, C.; Sun, Q.; Yang, Z.
Source:
Plant production science 2005 v.8 no.5 pp. 578-585
ISSN:
1343-943X
Subject:
quantitative trait loci; cultivars; random amplified polymorphic DNA technique; plant breeding; marker-assisted selection; wheat; powdery mildew; Blumeria graminis f. sp. tritici; chromosome mapping; Triticum aestivum; nucleotide sequences; disease resistance; genetic markers
DOI:
10.1626/pps.8.578

57. Isolation and characterization of eight microsatellite loci from Phaedranassa tunguraguae (Amaryllidaceae)

Author:
Oleas, N.H.; Meerow, A.W.; Francisco-Ortega, J.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 791
ISSN:
1471-8278
Subject:
Liliaceae; endangered species; microsatellite repeats; genetic markers; loci; nucleotide sequences; polymerase chain reaction; DNA primers; heterozygosity; alleles; Ecuador
Abstract:
... Phaedranassa tunguraguae is an endangered species endemic to Ecuador. Eight highly polymorphic microsatellite loci were isolated from an enriched genomic library for this species. Levels of polymorphism were evaluated using a total of 31 individuals from a single natural population. An average of 14.1 alleles per locus was detected, and observed heterozygosity ranged from 0.387 to 0.903. All but o ...
Handle:
10113/3052
DOI:
10.1111/j.1471-8286.2005.01064.x

58. Isolation and characterization of EST-derived microsatellite loci from the fungal wheat pathogen Phaeosphaeria nodorum

Author:
Stukenbrock, E.H.; Banke, S.; Zala, M.; McDonald, B.A.; Oliver, R.P.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 931-933
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; Parastagonospora nodorum; DNA primers; polymerase chain reaction; expressed sequence tags; heterozygosity; plant pathogenic fungi; genetic variation; genetic markers
DOI:
10.1111/j.1471-8286.2005.01120.x

59. Isolation and characterization of microsatellite DNA loci in sea bass, Lates calcarifer Bloch

Author:
Sim, M.P.; Othman, A.S.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 873-875
ISSN:
1471-8278
Subject:
marine fish; microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; genetic markers; Lates calcarifer; Malaysia
DOI:
10.1111/j.1471-8286.2005.01091.x

60. Isolation and characterization of microsatellite DNA markers in the grass Poa alpina L

Author:
Maurer, K.; Gautschi, B.; Weyand, A.; Stocklin, J.; Fischer, M.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 719-720
ISSN:
1471-8278
Subject:
microsatellite repeats; loci; agricultural land; DNA primers; polymerase chain reaction; genetic distance; Poa alpina; genetic variation; genetic markers; Switzerland
DOI:
10.1111/j.1471-8286.2005.01019.x

61. Isolation and characterization of microsatellite loci from mother-of-millions, Bryophyllum delagoense (Crassulaceae), and its hybrid with Bryophyllum daigremontianum, 'Houghton's hybrid'

Author:
Hannan-Jones, M.A.; Lowe, A.J.; Scott, K.D.; Graham, G.C.; Playford, J.P.; Zalucki, M.P.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 770-773
ISSN:
1471-8278
Subject:
microsatellite repeats; hybrids; loci; alleles; DNA primers; Kalanchoe daigremontiana; polymerase chain reaction; heterozygosity; interspecific hybridization; inheritance (genetics); genetic markers; Madagascar; Australia
DOI:
10.1111/j.1471-8286.2005.01058.x

62. Isolation and characterization of microsatellite loci in Santalum austrocaledonicum, Santalaceae

Author:
Bottin, L.; Vaillant, A.; Sire, P.; Cardi, C.; Bouvet, J.M.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 800-802
ISSN:
1471-8278
Subject:
microsatellite repeats; endangered species; forest trees; loci; alleles; DNA primers; Santalum; polymerase chain reaction; heterozygosity; genetic markers; New Caledonia
DOI:
10.1111/j.1471-8286.2005.01067.x

63. Isolation and characterization of 10 microsatellite loci in the Ponerinae ant Pachycondyla luteipes (Hymenoptera; Formicidae)

Author:
Takahashi, J.; Kikuchi, T.; Ohnishi, H.; Tsuji, K.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 749-751
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; Formicidae; genetic markers
DOI:
10.1111/j.1471-8286.2005.01051.x

64. Isolation and characterization of microsatellite markers from the sweet passion fruit (Passiflora alata Curtis: Passifloraceae)

Author:
Padua, J.G.; Oliveira, E.J.; Zucchi, M.I.; Oliveira, G.C.X.; Camargo, L.E.A.; Vieira, M.L.C.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 863-865
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; passion fruits; Passiflora alata; genetic markers
DOI:
10.1111/j.1471-8286.2005.01090.x

65. Isolation and characterization of microsatellite markers in the solitary hunting wasp Ancistrocerus adiabatus (Vespidae: Eumeninae) and their cross utility in other species of Ancistrocerus

Author:
Bushrow, E.S.; Cowan, D.P.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 803-805
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; Vespidae; DNA primers; polymerase chain reaction; heterozygosity; genetic markers; Michigan
DOI:
10.1111/j.1471-8286.2005.01068.x

66. Isolation and characterization of microsatellites in Bambusa arundinacea and cross species amplification in other bamboos

Author:
Nayak, S.; Rout, G.R.
Source:
Plant breeding 2005 v.124 no.6 pp. 599-602
ISSN:
0179-9541
Subject:
microsatellite repeats; alleles; genetic polymorphism; loci; DNA primers; Bambusa bambos; polymerase chain reaction; genetic variation; Dendrocalamus; Arundinaria; genetic markers
Abstract:
... Isolation and characterization of microsatellites was analysed in Bambusa arundinacea and cross species amplification studied in other bamboos. Microsatellites, tandem repeats of short nucleotide (1-6 bp) sequences, are the DNA marker of choice because of their highly polymorphic, ubiquitous distribution within the genome, ease of genotyping through Polymerase chain reaction, selectively neutral, ...
DOI:
10.1111/j.1439-0523.2005.01102.x

67. Isolation and characterization of microsatellites in the woody shrub, Calothamnus quadrifidus (Myrtaceae)

Author:
Elliott, C.P.; Byrne, M.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 757-759
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; Calothamnus; DNA primers; polymerase chain reaction; heterozygosity; inheritance (genetics); genetic markers
DOI:
10.1111/j.1471-8286.2005.01054.x

68. Isolation and characterization of microsatellites in two tropical butterflies, Drupadia theda and Arhopala epimuta (Lepidoptera: Lycaenidae)

Author:
Fauvelot, C.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 724-726
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; DNA primers; Lycaenidae; polymerase chain reaction; genetic markers; Indonesia
DOI:
10.1111/j.1471-8286.2005.01045.x

69. Isolation and characterization of novel dinucleotide repeat microsatellites in the Jamaican click beetle Pyrophorus plagiophthalamus (Coleoptera: Elateridae)

Author:
Velez, S.; Feder, L.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 899-901
ISSN:
1471-8278
Subject:
Elateridae; microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; linkage disequilibrium; genetic markers; Jamaica
DOI:
10.1111/j.1471-8286.2005.01106.x

70. Isolation, characterization and mapping of simple sequence repeat markers in zoysiagrass (Zoysia spp.)

Author:
Cai, Hong-wei; Inoue, Maiko; Yuyama, Nana; Takahashi, Wataru; Hirata, Mariko; Sasaki, Tohru
Source:
Theoretical and applied genetics 2005 v.112 no.1 pp. 158-166
ISSN:
0040-5752
Subject:
Zoysia; microsatellite repeats; genetic markers; chromosome mapping; DNA libraries; clones; DNA primers; polymerase chain reaction; loci; genetic polymorphism
Abstract:
... The genus Zoysia consists of 16 species that are naturally distributed on sea coasts and grasslands around the Pacific. Of these, Zoysia japonica, Zoysia matrella, and Zoysia tenuifolia are grown extensively as turfgrasses, and Z. japonica is also used as forage grass in Japan and other countries in East Asia. To develop simple sequence repeat (SSR) markers for zoysiagrass (Zoysia spp.), we used f ...
DOI:
10.1007/s00122-005-0118-9
PubMed:
16235048

71. Isolation of microsatellite loci in green abalone (Haliotis fulgens) and cross-species amplification in two other North American red (Haliotis rufescens) and pink (Haliotis corrugata) abalones

Author:
Cruz, P.; Ibarra, A.M.; Fiore-Amaral, G.; Galindo-Sanchez, C.E.; Mendoza-Carrion, G.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 857-859
ISSN:
1471-8278
Subject:
Haliotis rufescens; microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; Haliotis fulgens; genetic markers
DOI:
10.1111/j.1471-8286.2005.01088.x

72. Isolation of microsatellite markers from an interspecific hybrid isolate of the fungal plant pathogen Verticillium dahliae

Author:
Barbara, D.J.; Morton, A.; Miller, N.J.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 854-856
ISSN:
1471-8278
Subject:
microsatellite repeats; hybrids; alleles; loci; DNA primers; polymerase chain reaction; Verticillium albo-atrum; plant pathogenic fungi; interspecific hybridization; Verticillium dahliae; genetic markers
DOI:
10.1111/j.1471-8286.2005.01087.x

73. Isolation of 12 polymorphic microsatellite loci in the phytopathogenic fungus Alternaria brassicicola

Author:
Avenot, H.; Dongo, A.; Bataille-Simoneau, N.; Iacomi-Vasilescu, B.; Hamon, B.; Peltier, D.; Simoneau, P.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 948-950
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; Alternaria brassicicola; plant pathogenic fungi; genetic markers
DOI:
10.1111/j.1471-8286.2005.01125.x

74. Linkage of dermatomyositis in the Shetland Sheepdog to chromosome 35

Author:
Clark, L.A.; Credille, K.M.; Murphy, K.E.; Rees, C.A.
Source:
Veterinary dermatology 2005 v.16 no.6 pp. 392-394
ISSN:
0959-4493
Subject:
microsatellite repeats; phenotype; Shetland Sheepdog; skin lesions; dog diseases; dogs; inflammation; linkage disequilibrium; genetic disorders; genetic markers; chromosome mapping; animal genetics; disease diagnosis
Abstract:
... Dermatomyositis is an inflammatory disease of the skin and muscle and is most commonly found in the Shetland sheepdog. Both the clinical presentation and the age of onset of dermatomyositis vary widely, and the inability to diagnose dermatomyositis before clinical symptoms ensue has made control of the disease difficult. Identification of a genetic marker that cosegregates with dermatomyositis wou ...
DOI:
10.1111/j.1365-3164.2005.00469.x
PubMed:
16359306

75. Mapping of a spontaneous mutation for early flowering time in maize highlights contrasting allelic series at two-linked QTL on chromosome 8

Author:
Chardon, Fabien; Hourcade, Delphine; Combes, Valérie; Charcosset, Alain
Source:
Theoretical and applied genetics 2005 v.112 no.1 pp. 1-11
ISSN:
0040-5752
Subject:
Zea mays; corn; mutation; flowering; phenology; early development; chromosome mapping; quantitative trait loci; alleles; mutants; phenotype; genetic markers
Abstract:
... Only a few mutations affecting flowering time have been detected in maize. We analyzed a spontaneous early mutation, vgt-f7p, which appeared during production of the inbred line F7. This mutation shortens the time from planting to flowering by about 100 growing degree days (GDD), and reduces the number of nodes. It therefore seems to affect the timing of meristem differentiation from a vegetative ...
DOI:
10.1007/s00122-005-0050-z
PubMed:
16244856

76. Microsatellite analysis of genetic diversity in the Chinese alligator(Alligator sinensis) Changxing captive population

Author:
Xu, Qianghua; Fang, Shengguo; Wang, Zhiping; Wang, Zhenwei
Source:
Conservation genetics 2005 v.6 no.6 pp. 941-951
ISSN:
1566-0621
Subject:
Alligator sinensis; alleles; alligators; endangered species; genetic markers; genetic variation; heterozygosity; indigenous species; loci; microsatellite repeats; paternity; sequence analysis; China
Abstract:
... Chinese alligator (Alligator sinensis) is a critically endangered species endemic to China. In this study, the extent of genetic variation in the captive alligators of the Changxing Reserve Center was investigated using microsatellite markers derived from American alligators. Out of 22 loci employed, 21 were successfully amplified in the Chinese alligator. Sequence analysis showed loci in American ...
DOI:
10.1007/s10592-005-9081-x

77. Microsatellite loci for the Australian field cricket Teleogryllus oceanicus and their cross-utility in Teleogryllus commodus

Author:
Beveridge, M.; Simmons, L.W.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 733-735
ISSN:
1471-8278
Subject:
Teleogryllus commodus; microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; Teleogryllus oceanicus; genetic markers
DOI:
10.1111/j.1471-8286.2005.01042.x

78. Microsatellites for eastern Australian Banksia species

Author:
Usher, A.V.; Ayre, D.J.; Whelan, R.J.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 821-823
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; Banksia; genetic markers; Australia
DOI:
10.1111/j.1471-8286.2005.01075.x

79. Microsatellite variability in apricots (Prunus armeniaca L.) reflects their geographic origin and breeding history

Author:
Maghuly, Fatemeh; Fernandez, Eduviges Borroto; Ruthner, Szabolcs; Pedryc, Andrzej; Laimer, Margit
Source:
Tree genetics & genomes 2005 v.1 no.4 pp. 151-165
ISSN:
1614-2942
Subject:
Prunus armeniaca; alleles; apricots; breeding; cultivars; ecology; genetic distance; genetic markers; germplasm; heterozygosity; loci; microsatellite repeats; pedigree; provenance
Abstract:
... A collection of 133 apricot cultivars and three related species originating from different geographical regions were studied with 10 polymorphic microsatellite markers developed in apricot. Altogether, 133 alleles were identified in the set of accessions, with an average of 13.30 alleles per locus. Out of them, 32 alleles occurred only once in the investigated samples, especially in apricots origi ...
DOI:
10.1007/s11295-005-0018-9

80. Mining and survey of simple sequence repeats in expressed sequence tags of dicotyledonous species

Author:
Kumpatla, S.P.; Mukhopadhyay, S.
Source:
Genome = 2005 v.48 no.6 pp. 985-998
ISSN:
0831-2796
Subject:
microsatellite repeats; Magnoliopsida; bioinformatics; expressed sequence tags; gene banks; genetic markers
Abstract:
... Simple sequence repeat (SSR) markers are widely used in many plant and animal genomes due to their abundance, hypervariability, and suitability for high-throughput analysis. Development of SSR markers using molecular methods is time consuming, laborious, and expensive. Use of computational approaches to mine ever-increasing sequences such as expressed sequence tags (ESTs) in public databases permi ...
DOI:
10.1139/g05-060
PubMed:
16391668

81. Molecular characterization of a gender-linked DNA marker and a related gene in Mercurialis annua L

Author:
Khadka, D.K.; Nejidat, A.; Tal, M.; Golan-Goldhirsh, A.
Source:
Planta 2005 v.222 no.6 pp. 1063-1070
ISSN:
0032-0935
Subject:
Mercurialis annua; hexaploidy; DNA; genetic markers; sequence analysis; plant genetics; nucleic acid hybridization; amino acid sequences
Abstract:
... The dioecious Mercurialis annua L. was used as a model plant to study some aspects of the molecular basis of sex determination in plants. We report in this paper the characterization of a previously identified male specific DNA marker, OPB01-1562, from diploid dioecious M. annua. The marker co-segregated with male sex in the progeny of hormonally feminized males. Sequence analysis showed the prese ...
DOI:
10.1007/s00425-005-0046-6
PubMed:
16049676

82. Molecular cloning and genetic mapping of perennial ryegrass casein protein kinase 2 α-subunit genes

Author:
Shinozuka, H.; Hisano, H.; Ponting, R. C.; Cogan, N. O. I.; Jones, E. S.; Forster, J. W.; Yamada, T.
Source:
Theoretical and applied genetics 2005 v.112 no.1 pp. 167-177
ISSN:
0040-5752
Subject:
alleles; loci; linkage groups; Lolium perenne; chromosome mapping; nucleotide sequences; cDNA libraries; phenotypic variation; genetic markers; single nucleotide polymorphism
Abstract:
... The α-subunit of the casein protein kinase CK2 has been implicated in both light-regulated and circadian rhythm-controlled plant gene expression, including control of the flowering time. Two putative CK2α genes of perennial ryegrass (Lolium perenne L.) have been obtained from a cDNA library constructed with mRNA isolated from cold-acclimated crown tissue. The genomic organisation of the two genes ...
DOI:
10.1007/s00122-005-0119-8
PubMed:
16240106

83. Molecular mapping determines that Hessian fly resistance gene H9 is located on chromosome 1A of wheat

Author:
Kong, L.; Ohm, H.W.; Cambron, S.E.; Williams, C.E.
Source:
Plant breeding 2005 v.124 no.6 pp. 525
ISSN:
0179-9541
Subject:
Triticum aestivum; wheat; pest resistance; insect pests; Mayetiola destructor; genes; chromosome mapping; genetic markers; random amplified polymorphic DNA technique; nucleotide sequences; linkage (genetics); microsatellite repeats; loci
Abstract:
... Hessian fly Mayetiola destructor (Say) is one of the major insect pests of wheat (Triticum aestivum L.) worldwide. Hessian fly resistance gene H9 was previously reported to condition resistance to Hessian fly biotype L that is prevalent in many wheat-growing areas of eastern USA and an RAPD marker, OPO05(1000), linked to H9 in wheat was developed using wheat near-isogenic lines (NILs). However, ma ...
Handle:
10113/36694
DOI:
10.1111/j.1439-0523.2005.01139.x

84. Molecular marker-assisted selection for development of common bean lines resistant to angular leaf spot

Author:
Oliveira, E.J. de; Alzate-Marin, A.L.; Borem, A.; Fagundes, S. de A.; Barros, E.G. de; Moreira, M.A.
Source:
Plant breeding 2005 v.124 no.6 pp. 572-575
ISSN:
0179-9541
Subject:
Phaeoisariopsis griseola; plant breeding; beans; marker-assisted selection; random amplified polymorphic DNA technique; cultivars; fungal diseases of plants; Phaseolus vulgaris; leaf spot; plant pathogenic fungi; disease resistance; genes; genetic markers
Abstract:
... The objective of this work was to develop homozygous common bean lines carrying angular leaf spot resistance genes derived from the cultivars 'Mexico 54', 'MAR 2' and 'BAT 332' through markerassisted selection. Molecular markers SCAR OPN02(890), RAPD OPE04(500) and OPAO12(950) linked to the resistance genes of 'Mexico 54', 'MAR 2' and 'BAT 332', respectively, were used in segregating backcross-der ...
DOI:
10.1111/j.1439-0523.2005.01155.x

85. Polymerase chain reaction primers for microsatellite loci in the semi-aquatic grasshopper, Cornops aquaticum

Author:
Brede, E.G.; Beebee, T.J.C.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 914-916
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; Acrididae; genetic markers
DOI:
10.1111/j.1471-8286.2005.01111.x

86. QTLs for Fusarium head blight response in a wheat DH population of Wangshuibai/Alondra's

Author:
Jia, G.; Chen, P.; Qin, G.; Bai, G.; Wang, X.; Wang, S.; Zhou, B.; Zhang, S.; Liu, D.
Source:
Euphytica 2005 v.146 no.3 pp. 183
ISSN:
0014-2336
Subject:
Triticum aestivum; wheat; doubled haploids; quantitative trait loci; disease resistance; scab diseases; Gibberella zeae; chromosome mapping; genetic markers; microsatellite repeats; epistasis; field experimentation; additive gene effects; phenotypic variation; cultivars; China
Abstract:
... A doubled haploid (DH) wheat population derived from the cross Wangshuibai/Alondra's' was developed through chromosome doubling of haploids generated by anther culture of hybrids. Fusarium head blight (FHB) was evaluated for three years from 2001 to 2003 in Jianyang, Fujian Province, China, where epidemics of FHB have been consistently severe. After 307 pairs of simple sequence repeat (SSR) primer ...
Handle:
10113/9940
DOI:
10.1007/s10681-005-9001-7

87. RECORD: a novel method for ordering loci on a genetic linkage map

Author:
Van Os, Hans; Stam, Piet; Visser, Richard G. F.; Van Eck, Herman J.
Source:
Theoretical and applied genetics 2005 v.112 no.1 pp. 30-40
ISSN:
0040-5752
Subject:
loci; crossing over; computer analysis; chromosome mapping; computer software; algorithms; genetic markers
Abstract:
... A new method, REcombination Counting and ORDering (RECORD) is presented for the ordering of loci on genetic linkage maps. The method minimizes the total number of recombination events. The search algorithm is a heuristic procedure, combining elements of branch-and-bound with local reshuffling. Since the criterion we propose does not require intensive calculations, the algorithm rapidly produces an ...
DOI:
10.1007/s00122-005-0097-x
PubMed:
16228189

88. Relationships among 3 Kochia species based on PCR-generated molecular sequences and molecular cytogenetics

Author:
Lee, B.S.; Kim, M.Y.; Wang, R.R.C.; Waldron, B.L.
Source:
Genome = 2005 v.48 no.6 pp. 1104
ISSN:
0831-2796
Subject:
Bassia prostrata; Bassia scoparia; Bassia; weeds; forage crops; genetic markers; random amplified polymorphic DNA technique; polymerase chain reaction; chloroplast DNA; NADH dehydrogenase; genes; in situ hybridization; ribosomal DNA
Abstract:
... Forage kochia (Kochia prostrata ssp. virescens 'Immigrant' is native to the arid and semiarid regions of central Eurasia. It was introduced into the United States in 1966 as PI 314929 and released as a perennial forage shrub in 1984. Kochia americana is a perennial native to the United States, whereas Kochia scorparia is an introduced annual species that became a weed. To assess both the breeding ...
Handle:
10113/6665
DOI:
10.1139/g05-070
PubMed:
16391679

89. Significant microsynteny with new evolutionary highlights is detected between Arabidopsis and legume model plants despite the lack of macrosynteny

Author:
Kevei, Zoltán; Seres, Andrea; Kereszt, Attila; Kaló, Péter; Kiss, Péter; Tóth, Gábor; Endre, Gabriella; Kiss, György B.
Source:
Molecular genetics and genomics 2005 v.274 no.6 pp. 644-657
ISSN:
1617-4615
Subject:
Arabidopsis thaliana; bacterial artificial chromosomes; Medicago sativa; clones; Populus trichocarpa; chromosome mapping; genes; genomics; nucleotide sequences; Medicago truncatula; Lotus corniculatus var. japonicus; genetic markers
Abstract:
... The increased amount of data produced by large genome sequencing projects allows scientists to carry out important syntenic studies to a great extent. Detailed genetic maps and entirely or partially sequenced genomes are compared, and macro- and microsyntenic relations can be determined for different species. In our study, the syntenic relationships between key legume plants and two model plants, ...
DOI:
10.1007/s00438-005-0057-9
PubMed:
16273388

90. Sixteen microsatellite loci from Halesia tetraptera (Styracaceae)

Author:
Meerow, A.W.; Roh, M.S.; Schnell, R.J.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 777
ISSN:
1471-8278
Subject:
Halesia tetraptera; microsatellite repeats; genetic markers; loci; nucleotide sequences; polymerase chain reaction; DNA primers; heterozygosity; alleles
Abstract:
... Sixteen microsatellite loci isolated from Halesia tetraptera are described. All 16 are polymorphic, with four to 13 alleles across 15-19 members of a single half-sib family. Heterozygosity ranged from 0.067 to 1. One locus departs significantly from Hardy-Weinberg equilibrium in our test family. The test population shows significant heterozygote deficiency at this and two other loci. Thirteen loci ...
Handle:
10113/2958
DOI:
10.1111/j.1471-8286.2005.01060.x

91. SMOOTH: a statistical method for successful removal of genotyping errors from high-density genetic linkage data

Author:
van Os, Hans; Stam, Piet; Visser, Richard G. F.; van Eck, Herman J.
Source:
Theoretical and applied genetics 2005 v.112 no.1 pp. 187-194
ISSN:
0040-5752
Subject:
chromosome mapping; linkage (genetics); genetic markers; genotype; statistical analysis; Solanum tuberosum; potatoes; computer software; computer analysis
Abstract:
... High-density genetic linkage maps can be used for purposes such as fine-scale targeted gene cloning and anchoring of physical maps. However, their construction is significantly complicated by even relatively small amounts of scoring errors. Currently available software is not able to solve the ordering ambiguities in marker clusters, which inhibits the application of high-density maps. A statistic ...
DOI:
10.1007/s00122-005-0124-y
PubMed:
16258753

92. Species distinction in Irish populations of Quercus petraea and Q. robur: morphological versus molecular analyses

Author:
Kelleher, C.T.; Hodkinson, T.R.; Douglas, G.C.; Kelly, D.L.
Source:
Annals of botany 2005 v.96 no.7 pp. 1237-1246
ISSN:
0305-7364
Subject:
Quercus petraea; forest trees; amplified fragment length polymorphism; geographical variation; Quercus robur; plant morphology; population genetics; genetic markers; genetic variation; plant taxonomy; leaves; Ireland
Abstract:
... BACKGROUND AND AIMS: Populations of oak (Quercus petraea and Q. robur) were investigated using morphological and molecular (AFLP) analyses to assess species distinction. The study aimed to describe species distinction in Irish oak populations and to situate this in a European context. METHODS: Populations were sampled from across the range of the island of Ireland. Leaf morphological characters we ...
DOI:
10.1093/aob/mci275
PubMed:
16199484
PubMed Central:
PMC4247074

93. Species-specific microsatellite markers to monitor gene flow between exotic poplars and their natural relatives in eastern North America

Author:
Khasa, D.; Pollefeys, P.; Navarro-Quezada, A.; Perinet, P.; Bousquet, J.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 920-923
ISSN:
1471-8278
Subject:
microsatellite repeats; hybrids; alleles; loci; Populus balsamifera; DNA primers; Populus deltoides; polymerase chain reaction; heterozygosity; Populus trichocarpa; Populus maximowiczii; interspecific hybridization; Populus nigra; genetic markers
DOI:
10.1111/j.1471-8286.2005.01114.x

94. Temporal genetic structure of a drone congregation area of the giant Asian honeybee (Apis dorsata)

Author:
Kraus, F. B.; Koeniger, N.; Tingek, S.; Moritz, R. F. A.
Source:
Naturwissenschaften 2005 v.92 no.12 pp. 578-581
ISSN:
0028-1042
Subject:
Apis dorsata; gene flow; genetic markers; genetic variation; genotyping; honey bees; inbreeding; males; population size
Abstract:
... The giant Asian honeybee (Apis dorsata), like all other members of the genus Apis, has a complex mating system in which the queens and males (drones) mate at spatially defined drone congregation areas (DCAs). Here, we studied the temporal genetic structure of a DCA of A. dorsata over an 8-day time window by the genotyping of sampled drones with microsatellite markers. Analysis of the genotypic dat ...
DOI:
10.1007/s00114-005-0044-3
PubMed:
16187127

95. Ten microsatellite loci for the small red-eyed damselfly Erythromma viridulum (Charpentier)

Author:
Keat, S.; Thompson, D.J.; Kemp, S.J.; Watts, P.C.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 788-790
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; heterozygosity; population genetics; genetic variation; Zygoptera; genetic markers; United Kingdom
DOI:
10.1111/j.1471-8286.2005.01063.x

96. Ten polymorphic microsatellite loci in the giant scallop (Mizuhopecten yessoensis)

Author:
An, H.S.; Park, J.Y.; Lee, G.; Lee, D.S.; Lee, C.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 806-808
ISSN:
1471-8278
Subject:
microsatellite repeats; alleles; loci; DNA primers; polymerase chain reaction; Pectinidae; heterozygosity; scallops; genetic markers
DOI:
10.1111/j.1471-8286.2005.01069.x

97. Ten polymorphic microsatellite markers developed in the masson pine moth Dendrolimus punctatus Walker (Lepidoptera: Lasiocampidae)

Author:
Ji, Y.J.; Hua, Y.P.; Li, Y.D.; Liu, H.T.; Shi, C.M.; Li, D.M.; Zhang, D.X.
Source:
Molecular ecology notes 2005 v.5 no.4 pp. 911-913
ISSN:
1471-8278
Subject:
microsatellite repeats; insect pests; alleles; loci; DNA primers; polymerase chain reaction; plant pests; heterozygosity; Dendrolimus punctatus; genetic markers
DOI:
10.1111/j.1471-8286.2005.01110.x

98. Transferability of wheat microsatellites to diploid Aegilops species and determination of chromosomal localizations of microsatellites in the S genome

Author:
Adonina, I.G.; Salina, E.A.; Pestsova, E.G.; Roder, M.S.
Source:
Genome = 2005 v.48 no.6 pp. 959-970
ISSN:
0831-2796
Subject:
microsatellite repeats; Aegilops searsii; chromosomes; genome; Aegilops speltoides; phylogeny; wheat; chromosome addition; chromosome mapping; Triticum aestivum; Aegilops longissima; genetic markers
Abstract:
... Overall, 253 genomic wheat (Triticum aestivum) microsatellite markers were studied for their transferability to the diploid species Aegilops speltoides, Aegilops longissima, and Aegilops searsii, representing the S genome. In total, 88% of all the analyzed primer pairs of markers derived from the B genome of hexaploid wheat amplified DNA fragments in the genomes of the studied species. The transfe ...
DOI:
10.1139/g05-072
PubMed:
16391665

99. Two Tsetse Fly Species, Glossina palpalis gambiensis and Glossina morsitans morsitans, Carry Genetically Distinct Populations of the Secondary Symbiont Sodalis glossinidius

Author:
Geiger, Anne; Cuny, Gérard; Frutos, Roger
Source:
Applied and environmental microbiology 2005 v.71 no.12 pp. 8941-8943
ISSN:
0099-2240
Subject:
Glossina morsitans morsitans; Glossina palpalis gambiensis; insect pests; endosymbionts; Sodalis glossinidius; strains; genetic variation; genetic markers; amplified fragment length polymorphism
Abstract:
... Genetic diversity among Sodalis glossinidius populations was investigated using amplified fragment length polymorphism markers. Strains collected from Glossina palpalis gambiensis and Glossina morsitans morsitans flies group into separate clusters, being differentially structured. This differential structuring may reflect different host-related selection pressures and may be related to the differe ...
DOI:
10.1128/AEM.71.12.8941-8943.2005
PubMed:
16332895
PubMed Central:
PMC1317321

100. Evaluation of three strategies using DNA markers for traceability in aquaculture species

Author:
Hayes, B.; Sonesson, A.K.; Gjerde, B.
Source:
Aquaculture 2005 v.250 no.1-2 pp. 70-81
ISSN:
0044-8486
Subject:
Salmo salar; salmon; anadromous fish; fish products; traceability; genetic markers; animal identification
Abstract:
... Traceability schemes for aquaculture species are essential for tracing market product to farm of origin in the event of detection of disease or toxins in the market fish. DNA markers have been proposed as a tool for traceability. These markers can be used to genotype fish by taking a sample from live fish or fish product at any stage along the production chain. In this paper, we consider three alt ...