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- Author:
- Marcus Macht; Andreas Marquardt; Sören-Oliver Deininger; Eugen Damoc; Markus Kohlmann; Michael Przybylski
- Source:
- Analytical and bioanalytical chemistry 2004 v.378 no.4 pp. 1102-1111
- ISSN:
- 1618-2642
- Subject:
- binding proteins; cattle; databases; dissociation; epitope mapping; epitopes; excision; humans; mass spectrometry; monoclonal antibodies; muscle protein; myocardial infarction; myocardium; peptide mapping; peptides; proteolysis; troponin T
- Abstract:
- ... We describe here a new approach for the identification of affinity-bound proteins by proteolytic generation and mass spectrometric analysis of their antibody bound epitope peptides (epitope excision). The cardiac muscle protein troponin T was chosen as a protein antigen because of its diagnostic importance in myocardial infarct, and its previously characterised epitope structure. Two monoclonal an ...
- DOI:
- 10.1007/s00216-003-2159-8
- https://doi.org/10.1007/s00216-003-2159-8
2. "Data_market" as a realistic tool for decision-making in the integrated pest management challenge
- Author:
- Boll, R.; Bout, A.; Doise, S.; Bernardet, X.; Poncet, C.
- Source:
- Acta horticulturae 2011 v. no.919 pp. 163-170
- ISSN:
- 0567-7572
- Subject:
- computer software; crops; databases; decision making; genotyping; greenhouses; integrated pest management; marketing; monitoring; pesticides; pests; population dynamics; researchers; risk characterization; statistical models; statistics; technicians
- Abstract:
- ... Acquisition of accurate statistics regarding pest outbreak factors on cultivated crops leads to invaluable experimental data. Abundant information is generally recorded in a warehouse database, left to be analyzed at a later date or to be quickly communicated to the users in a structured way. The OLAP (Online Analytical Processing) concept mines the warehouse database to report answers to specific ...
- Author:
- L. Eyer; K. Hruska
- Source:
- Veterinární medicína v.57 no.9 pp. 439-513
- ISSN:
- 0375-8427
- Subject:
- Camelidae; Chondrichthyes; antibodies; databases; diagnostic techniques; human diseases; humans; molecular weight; therapeutics; water solubility
- Abstract:
- ... Single-domain antibody (sdAb) fragments derived from heavy-chain antibodies of camelids and cartilaginous fish represent a new generation of therapeutic agents and immunoreagents. Due to their unique characteristics, such as low molecular weight, high physical-chemical stability, good water solubility, and the ability to bind antigens inaccessible to conventional antibodies, they could potentially ...
- DOI:
- 10.17221/6336-vetmed
- https://doi.org/10.17221/6336-vetmed
- Author:
- K. Hruska; M. Franek
- Source:
- Veterinární medicína v.57 no.1 pp. 1-35
- ISSN:
- 0375-8427
- Subject:
- case studies; databases; environmental protection; pig manure; pollution; risk; sulfamethazine
- Abstract:
- ... Sulfonamides are widely used in treatment of animals and humans but pose a risk as environmental pollutants. An analysis of 1588 publications focused on sulfonamides is presented here. The review deals with environmental pollution with sulfonamides, described in papers indexed in the database Web of Science from 1938 to 2011. More in depth details are presented regarding publication activity durin ...
- DOI:
- 10.17221/4969-vetmed
- https://doi.org/10.17221/4969-vetmed
- Author:
- Techtmann, Stephen M.; Colman, Albert S.; Robb, Frank T.
- Source:
- Environmental microbiology 2009 v.11 no.5 pp. 1027-1037
- ISSN:
- 1462-2912
- Subject:
- Archaea; Carboxydothermus hydrogenoformans; Chromatiaceae; acetates; bacteria; carbon monoxide; databases; ecosystems; effluents; energy; energy use and consumption; genes; headspace analysis; metagenomics; methane production; niches; oxidation; prototypes; toxicity; toxins
- Abstract:
- ... Carbon monoxide (CO), while a potent toxin, is also a key intermediate in major autotrophic pathways such as methanogenesis and acetogenesis. The ability of purple sulfur bacteria to use CO as an energy source was first described by Uffen in 1976. The prototype extremely thermophilic carboxydotroph Carboxydothermus hydrogenoformans was described in 1991. Eight bacteria and one archaeon that utiliz ...
- DOI:
- 10.1111/j.1462-2920.2009.01865.x
- PubMed:
- 19239487
- https://doi.org/10.1111/j.1462-2920.2009.01865.x
6. (Micro)plastics: A possible criterion for beach certification with a focus on the Blue Flag Award
- Author:
- Gurusamy Kutralam-Muniasamy; Fermín Pérez-Guevara; V.C. Shruti
- Source:
- Science of the total environment 2022 v.803 pp. 150051
- ISSN:
- 0048-9697
- Subject:
- certification; coastal zone management; databases; decision making; environment; microplastics; outreach; pollution; tourism
- Abstract:
- ... On the one hand, environmental certifications like the Blue Flag award (BFA) are well-known globally for its role in beach management and tourism attraction. Plastic pollution like microplastics, on the other hand, has become a global concern due to their increasing persistence and negative environmental repercussions. This paper examines and discusses the factors that would lead to (micro)plastic ...
- DOI:
- 10.1016/j.scitotenv.2021.150051
- https://doi.org/10.1016/j.scitotenv.2021.150051
- Author:
- Marcella Ruschi Mendes Saade; Alexander Passer; Florian Mittermayr
- Source:
- international journal of life cycle assessment 2020 v.25 no.2 pp. 188-207
- ISSN:
- 0948-3349
- Subject:
- carbon; cement; concrete; construction materials; databases; environmental impact; environmental performance; life cycle assessment; manufacturing; models
- Abstract:
- ... PURPOSE: The carbon intensity that accompanies concrete manufacturing has been widely investigated. However, depending on the intended use, concrete’s embedded materials’ quantities can change significantly, affecting its environmental performance. Seldom investigated, sprayed concrete’s impact differs from that of typical ready mixed concrete, which justifies a differentiated inspection. Our goal ...
- DOI:
- 10.1007/s11367-019-01676-w
- https://doi.org/10.1007/s11367-019-01676-w
- Author:
- Susanne Minkus; Stefan Bieber; Thomas Letzel
- Source:
- Analytical methods 2021 v.13 no.17 pp. 2044-2054
- ISSN:
- 1759-9679
- Subject:
- aquatic environment; chemical species; databases; hydrophilic interaction chromatography; mass spectrometry; prioritization; surface water; watersheds; Danube River
- Abstract:
- ... Recently, more and more research has been focused on the analysis of polar organic compounds as they tend to be persistent and mobile in the aquatic environment. The serial coupling of reversed-phase and hydrophilic interaction liquid chromatography allows the separation of analytes of an extended polarity range within a single run. The non-target screening approach was driven by high-resolution m ...
- DOI:
- 10.1039/d1ay00434d
- https://doi.org/10.1039/d1ay00434d
- Author:
- Hua Zhao
- Source:
- Cryobiology 2013 v.67 no.3 pp. 419
- ISSN:
- 0011-2240
- Subject:
- administrative management; biological specimen banks; biomarkers; blood; carcinogenesis; databases; dose response; freeze-thaw cycles; microRNA; neoplasms; nitrogen; polymerase chain reaction; prognosis; selection criteria; storage time; straw
- Abstract:
- ... Because of the significance of microRNA (miRNA) in carcinogenesis, circulating miRNAs offer unique opportunities as minimal invasive biomarkers for cancer diagnosis and prognosis. To date, more than 200 studies have been reported. However, no single miRNA has been consistently observed across the studies. The wide inconsistency might be due to the fact that a significant amount of pre-analytic var ...
- DOI:
- 10.1016/j.cryobiol.2013.09.081
- https://doi.org/10.1016/j.cryobiol.2013.09.081
- Author:
- Kirana Chomkhamsri; Thumrongrut Mungcharoen; Chantana Yuvaniyama
- Source:
- international journal of life cycle assessment 2017 v.22 no.11 pp. 1760-1770
- ISSN:
- 0948-3349
- Subject:
- biofuels; carbon footprint; case studies; climate change; construction materials; data collection; databases; decision making; design for environment; developing countries; development projects; education programs; energy content; experts; fuel oils; funding; gasoline; guidelines; human resources; job training; kerosene; life cycle inventory; liquid petroleum gas; metals; models; natural gas; nontariff trade barriers; petroleum; public policy; recycling; researchers; stakeholders; sulfur; transportation; world markets; Japan; Thailand
- Abstract:
- ... PURPOSE: Due to various environmental pressures such as climate change and scarcity of natural resources, as well as nontariff barriers from trade partners, Thailand has established the Thai national life cycle inventory (LCI) database in 2006. In the 1st phase (2006–2007), three working groups were developed for natural gas, refinery, and petrochemical products. Another seven working groups were ...
- DOI:
- 10.1007/s11367-016-1160-3
- https://doi.org/10.1007/s11367-016-1160-3
- Author:
- George Emmanouil; George Galanis; Christina Kalogeri; George Zodiatis; George Kallos
- Source:
- Renewable energy 2016 v.90 pp. 399-419
- ISSN:
- 0960-1481
- Subject:
- databases; environmental factors; mathematical models; politics; water power; water waves; wind; Greece; Mediterranean Sea
- Abstract:
- ... Nowadays, renewable energy resources are one of the top priority issues for the environmental and political community. In particular, wind and wave energy are two of the most promising solutions, with great potential from research and technological point of view. In this work, an integrated high resolution platform, consisting of state-of-the-art wind-wave numerical models, has been utilized and p ...
- DOI:
- 10.1016/j.renene.2016.01.031
- https://doi.org/10.1016/j.renene.2016.01.031
- Author:
- Ryan P. Goff; Stephen G. Quallich; Robert A. Buechler; Jeunghwan Choi; John C. Bischof; Paul A. Iaizzo
- Source:
- Cryobiology 2013 v.67 no.3 pp. 427
- ISSN:
- 0011-2240
- Subject:
- atrial fibrillation; catheters; cell culture; computer software; cryosurgery; databases; dyes; esophagus; females; image analysis; literature; lungs; myocardium; necrosis; photographs; staining; swine; t-test; temperature profiles; thermography; variance; viability assays
- Abstract:
- ... Cardiac balloon and catheter cryoablations for the treatment of atrial fibrillation have been gaining attention as approaches for treating arrhythmias, in particular for isolation of the pulmonary veins (PV). Despite widespread and growing clinical use of cardiac cryoablation, there are still questions regarding dosing and treatment time, which may affect both efficacy and collateral injury. To da ...
- DOI:
- 10.1016/j.cryobiol.2013.09.108
- https://doi.org/10.1016/j.cryobiol.2013.09.108
- Author:
- Costas Panayiotou; Ioannis Zuburtikudis; Vassily Hatzimanikatis
- Source:
- Industrial & engineering chemistry process design and development 2019 v.58 no.28 pp. 12787-12800
- ISSN:
- 1520-5045
- Subject:
- databases; hydrogen bonding; prediction; process design; quantitative structure-activity relationships; quantum mechanics; solubility; solvation; solvation energy; thermodynamic models; thermodynamics
- Abstract:
- ... A simple predictive molecular thermodynamic model for bulk phases and interfaces is presented. The model combines features of the quantitative structure–property relationships (QSPR) approach, the equation-of-state approach, and quantum-chemical calculations. Simple formalisms on a sound thermodynamic basis have been developed for the main thermodynamic quantities of pure components and mixtures w ...
- DOI:
- 10.1021/acs.iecr.9b02908
- https://doi.org/10.1021/acs.iecr.9b02908
- Author:
- D.P. Eisenberg; J.L. Jimenez Rios; Y. Rabin; M.J. Taylor
- Source:
- Cryobiology 2013 v.67 no.3 pp. 430
- ISSN:
- 0011-2240
- Subject:
- biocompatible materials; butanediol; carotid arteries; chemical structure; cryopreservation; cryoprotectants; crystallization; databases; goats; ice; ice nucleation; mechanical stress; models; polyethylene glycol; propylene glycol; surface area; temperature profiles; thermal expansion; tissues
- Abstract:
- ... Thermal expansion of tissues permeated with various combinations of the cryoprotective agent (CPA) cocktail DP6 and synthetic ice modulators (SIMs) was measured in this study. The ensuing data augments a database on the physical properties of biomaterials with applications to thermo-mechanical stress analysis, in an effort to improve the outcome of cryopreservation. All materials tend to change vo ...
- DOI:
- 10.1016/j.cryobiol.2013.09.120
- https://doi.org/10.1016/j.cryobiol.2013.09.120
- Author:
- M. Bowman; R. Jacobs; M. Gordon; M. Lahoti; P. Samdani
- Source:
- Journal of equine veterinary science 2021 v.100 pp. 103475
- ISSN:
- 0737-0806
- Subject:
- bioinformatics; cost effectiveness; databases; demographic statistics; horses; metadata; microbiome; phylogeny; surveys; veterinary medicine
- Abstract:
- ... As sequencing becomes more cost effective, large-scale microbiome studies will become commonplace. Therefore, methodology for analyzing large amounts of microbiome data would benefit the equine science community. The MQ project (Microbiome Quotient®; Purina Animal Nutrition, Gray Summit, MO) is a large-scale, nation-wide, analysis of the equine microbiome. The aim of this project is to characteriz ...
- DOI:
- 10.1016/j.jevs.2021.103475
- https://doi.org/10.1016/j.jevs.2021.103475
- Author:
- Toby Wilkinson; Daniel Korir; Moses Ogugo; Robert D. Stewart; Mick Watson; Edith Paxton; John Goopy; Christelle Robert
- Source:
- Genome biology 2020 v.21 no.1 pp. 229
- ISSN:
- 1474-760X
- Subject:
- Boran; biochemical pathways; cattle; databases; developing countries; diet; energy requirements; forage; genome; indigenous species; mash; metagenomics; microbiome; restricted feeding; rumen fermentation; rumen fluids; rumen microorganisms; zebu; zebu breeds; Sub-Saharan Africa
- Abstract:
- ... BACKGROUND: The Boran (Bos indicus), indigenous Zebu cattle breed from sub-Saharan Africa, is remarkably well adapted to harsh tropical environments. Due to financial constraints and low-quality forage, African livestock are rarely fed at 100% maintenance energy requirements (MER) and the effect of sub-optimal restricted feeding on the rumen microbiome of African Zebu cattle remains largely unexpl ...
- DOI:
- 10.1186/s13059-020-02144-7
- https://doi.org/10.1186/s13059-020-02144-7
- Author:
- Eliana B. Giuntini; Kristy S. Coelho; Fernanda Grande; Dirce M.L. Marchioni; Eduardo De Carli; Rosely Sichieri; Rosângela A. Pereira; Eduardo Purgatto; Bernadette D.G.M. Franco; Franco M. Lajolo; Elizabete W. Menezes
- Source:
- Journal of food composition and analysis 2019 pp. -
- ISSN:
- 0889-1575
- Subject:
- Food and Agriculture Organization; computer software; data collection; databases; dietary surveys; food composition; geography; guidelines; minerals; nutrient content; nutrient intake; nutrient retention; nutrition assessment; nutritive value; proximate composition; raw foods; recipes; statistics; vitamins; Brazil
- Abstract:
- ... The Brazilian Food Composition Table’s Nutrient Intake Evaluation Database (TBCA NIE-DB) was created under the coordination of the Brazilian Network of Food Data Systems/University of São Paulo and the Food Research Center (FoRC). The TBCA NIE-DB is intended as a tool for nutritional intake assessment in Brazil. The data collected during the previous years, following the guidelines of the FAO/INFO ...
- DOI:
- 10.1016/j.jfca.2019.103286
- https://doi.org/10.1016/j.jfca.2019.103286
- Author:
- Sonia Rosario Calliope; Norma Sammán
- Source:
- Journal of food composition and analysis 2019 pp. -
- ISSN:
- 0889-1575
- Subject:
- World Health Organization; breads; chemical analysis; compliance; databases; food groups; food industry; meat products; monitoring; nutrition labeling; processed foods; public health; salt content; sodium
- Abstract:
- ... The initiative “Less salt, more life”, supported by the Pan American Health Organization (PAHO) and the World Health Organization of the United Nations (WHO), made recommendations to reduce the salt content in processed foods, and these have been taken very seriously by the Argentine public health authorities. The aims of this study were to i) collect data on sodium content from nutritional labels ...
- DOI:
- 10.1016/j.jfca.2019.103289
- https://doi.org/10.1016/j.jfca.2019.103289
- Author:
- A.L. Wagner; R.K. Splan; A.S. Biddle; I.D. Girard
- Source:
- Journal of equine veterinary science 2021 v.100 pp. 103476
- ISSN:
- 0737-0806
- Subject:
- Anaerovibrio; Clostridium butyricum; Clostridium perfringens; Escherichia coli; Lachnospiraceae; Ruminococcaceae; Salmonella; Treponema; antibiotics; butyrates; databases; digestibility; digestion; ecosystems; genes; hindgut; horses; humans; intestinal microorganisms; intestines; lactic acid; lipid metabolism; lipids; microbiome; obesity; pH; prebiotics; sequence analysis; t-test; taxonomy; trimethoprim; veterinary medicine
- Abstract:
- ... Antibiotic (AB) therapies commonly used by veterinarians to treat bacterial infections can have side effects that stem from a disruption of the hindgut microbiota with a reduction of celluloytic bacteria and a proliferation of pathogenic strains. In practice, many veterinarians recommend a direct fed microbial (DFM) along with AB as DFM have been shown to mitigate some of the effects of AB on feca ...
- DOI:
- 10.1016/j.jevs.2021.103476
- https://doi.org/10.1016/j.jevs.2021.103476
- Author:
- C. Thongkittidilok; Y. Li; D. Wildt; N. Songsasen
- Source:
- Reproduction, fertility, and development 2016 v.28 no.2 pp. 198-199
- ISSN:
- 1031-3613
- Subject:
- Felidae; cats; computer software; databases; desorption; developmental stages; embryogenesis; follicular development; glycerophosphates; goats; granulosa cells; in vitro culture; lipid composition; mass spectrometry; oocytes; principal component analysis; rats; spaying; species identification; temporal variation; viability; Western Australia
- Abstract:
- ... Cytoplasmic lipids play key roles during oocyte and embryo development. However, there is little information on the changes in lipid types during intraovarian follicular and oocyte growth. Here, we used matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometry to understand lipid composition in the cat oocyte during differing stages of folliculogenesis. Follicles at ...
- DOI:
- 10.1071/RDv28n2Ab136
- https://doi.org/10.1071/RDv28n2Ab136
- Author:
- Kai-qiang Zhang; Hai-shen Wen; Ji-fang Li; Xin Qi; Hong-ying Fan; Xiao-yan Zhang; Yuan Tian; Yang Liu; Hao-long Wang; Yun Li
- Source:
- Comparative biochemistry and physiology 2019 v.235 pp. 1-11
- ISSN:
- 1095-6433
- Subject:
- Lateolabrax japonicus; bass; conserved sequences; databases; enzyme activation; euryhaline species; gene expression regulation; genes; genome-wide association study; phylogeny; proteins; quantitative polymerase chain reaction; reverse transcriptase polymerase chain reaction; salinity; salt stress; sequence alignment; transcriptomics; tryptophan 5-monoxygenase; tyrosine 3-monooxygenase
- Abstract:
- ... The tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation (14-3-3) proteins are a group of highly conserved homologous and heterologous proteins involved in a wild range of physiological processes, including the regulation of many molecular phenomena under different environmental salinities. In this study, we identified eleven 14-3-3 genes from the spotted sea bass (Lateolabrax maculatus) ...
- DOI:
- 10.1016/j.cbpa.2019.05.005
- https://doi.org/10.1016/j.cbpa.2019.05.005
- Author:
- Miguel Delgado; Francisco Javier Aceituno; Gustavo Barrientos
- Source:
- Quaternary international 2015 v.363 pp. 55-64
- ISSN:
- 1040-6182
- Subject:
- carbon; charcoal; data collection; databases; human settlements; provenance; radiocarbon dating; radionuclides; research projects; selection criteria; Colombia
- Abstract:
- ... The aim of this paper is to make a critical appraisal of the available ¹⁴C dataset from Northwest South America (Colombia) corresponding to the Pleistocene/Holocene transition (ca. 12,000–8000 ¹⁴C years BP). The first step in the study was to assemble from both published and unpublished sources an exhaustive database of ¹⁴C dates (n = 85), recording data regarding the environmental setting and spa ...
- DOI:
- 10.1016/j.quaint.2014.09.011
- https://doi.org/10.1016/j.quaint.2014.09.011
- Author:
- Dana Kalabova; Frantisek Filandr; Miroslava Alblova; Olivia Petrvalska; Matej Horvath; Petr Man; Tomas Obsil; Veronika Obsilova
- Source:
- FEBS journal 2020 v.287 no.16 pp. 3494-3510
- ISSN:
- 1742-464X
- Subject:
- apoptosis; caspase-2; crystallography; databases; death; deuterium; dimerization; mass spectrometry; nuclear localization signals; peptides; phosphorylation
- Abstract:
- ... Among all species, caspase‐2 (C2) is the most evolutionarily conserved caspase required for effective initiation of apoptosis following death stimuli. C2 is activated through dimerization and autoproteolytic cleavage and inhibited through phosphorylation at Ser¹³⁹ and Ser¹⁶⁴, within the linker between the caspase recruitment and p19 domains of the zymogen, followed by association with the adaptor ...
- DOI:
- 10.1111/febs.15215
- https://doi.org/10.1111/febs.15215
- Author:
- Aneta Smidova; Miroslava Alblova; Dana Kalabova; Katarina Psenakova; Michal Rosulek; Petr Herman; Tomas Obsil; Veronika Obsilova
- Source:
- FEBS journal 2018 v.285 no.22 pp. 4196-4213
- ISSN:
- 1742-464X
- Subject:
- apoptosis; caspase-2; crosslinking; databases; dimerization; fluorescence emission spectroscopy; models; nuclear localization signals; nuclear magnetic resonance spectroscopy; phosphorylation; protein subunits; proteolysis; scaffolding proteins; small-angle X-ray scattering
- Abstract:
- ... Caspase‐2 is an apical protease responsible for the proteolysis of cellular substrates directly involved in mediating apoptotic signaling cascades. Caspase‐2 activation is inhibited by phosphorylation followed by binding to the scaffolding protein 14‐3‐3, which recognizes two phosphoserines located in the linker between the caspase recruitment domain and the p19 domains of the caspase‐2 zymogen. H ...
- DOI:
- 10.1111/febs.14670
- https://doi.org/10.1111/febs.14670
- Author:
- Li, Zhiyong; Hu, Ye; Liu, Yan; Huang, Yi; He, Liming; Miao, Xiaoling
- Source:
- World journal of microbiology & biotechnology 2007 v.23 no.9 pp. 1265-1272
- ISSN:
- 0959-3993
- Subject:
- Firmicutes; alpha-Proteobacteria; bacteria; bacterial communities; clones; community structure; databases; gamma-Proteobacteria; geography; phylogeny; restriction fragment length polymorphism; ribosomal DNA; symbionts; South China Sea
- Abstract:
- ... Culture-independent molecular techniques, 16S rDNA clone library alongside RFLP and phylogenetic analysis, were applied to investigate the bacterial diversity associated with three South China Sea sponges, Stelletta tenui, Halichondria rugosa and Dysidea avara. A wide bacterial diversity was detected according to total genomic DNA-based 16S rDNA clone library, abundant clones with low identify wit ...
- DOI:
- 10.1007/s11274-007-9359-x
- https://doi.org/10.1007/s11274-007-9359-x
- Author:
- Sukriye Celikkol-Aydin; Christine C. Gaylarde; Tim Lee; Robert E. Melchers; Devin L. Witt; Iwona B. Beech
- Source:
- Marine environmental research 2016 v.122 pp. 105-112
- ISSN:
- 0141-1136
- Subject:
- Bacillariophyceae; DNA; biofilm; carbon; community structure; data analysis; databases; genes; marine environment; oxidants; photosynthesis; plankton; ribosomal RNA; seawater; steel; sulfur; Gulf of Guinea
- Abstract:
- ... 16S rRNA gene profiling using a pipeline involving the Greengenes database revealed that bacterial populations in innermost (proximal to the steel surface) and outer regions of biofilms on carbon steel exposed 3 m below the surface at an offshore site in the Gulf of Guinea differed from one another and from seawater. There was a preponderance of gammaproteobacterial sequences, representing organis ...
- DOI:
- 10.1016/j.marenvres.2016.10.001
- https://doi.org/10.1016/j.marenvres.2016.10.001
- Author:
- Sunday B. Akinde; Folasade M. Adeyemi; Omotayo O. Oyedara; Temitope F. Ajani; Waidi F. Sule; Janet O. Olaitan; Bamidele A. Iwalokun; Olabisi O. Ojo
- Source:
- Data in Brief 2022 v.42 pp. 108269
- ISSN:
- 2352-3409
- Subject:
- Actinobacteria; Bayesian theory; Cyanobacteria; Firmicutes; Proteobacteria; birds; data collection; databases; farms; fish; food safety; genes; humans; metagenomics; poultry; poultry manure; public health; taxonomy; Benin; Cameroon; Madagascar; Nigeria
- Abstract:
- ... In an integrated poultry-fish (IPF) farming system, fish and bird are reared simultaneously. It is a common practice in Sub-Saharan Africa countries like Nigeria, Cameroon, Madagascar, and Benin, offering economic benefits to farmers and minimizing farm running costs. It seems like another way for farmers to manage poultry waste as it is a common practice in IPF farm settings to feed reared fishes ...
- DOI:
- 10.1016/j.dib.2022.108269
- https://doi.org/10.1016/j.dib.2022.108269
- Author:
- Ghodhbane-Gtari, Faten; Nouioui, Imen; Chair, Mohamed; Boudabous, Abdellatif; Gtari, Maher
- Source:
- Microbial ecology 2010 v.60 no.3 pp. 487-495
- ISSN:
- 0095-3628
- Subject:
- Frankia; databases; genes; hosts; intergenic DNA; polymerase chain reaction; ribosomal RNA; sequence analysis; soil erosion; symbiosis; transfer RNA
- Abstract:
- ... 16S-23S rRNA internally transcribed spacer (ITS) sequences from 53 Frankia strains were sequenced and sized from polymerase chain reaction amplification products and compiled with 14 selected 16S-23S ITS sequences from public database. Frankia genomes included two to three ITS copies lacking length polymorphism except for nine strains. No tRNA gene was encountered in this region. Frankia strains e ...
- DOI:
- 10.1007/s00248-010-9641-6
- PubMed:
- 20179918
- https://doi.org/10.1007/s00248-010-9641-6
- Author:
- Carolina Núñez; Miriam Baeta; Nerea Ibarbia; Urko Ortueta; Susana Jiménez‐Moreno; José Luis Blazquez‐Caeiro; Juan José Builes; Rene J. Herrera; Begoña Martínez‐Jarreta; Marian M. de Pancorbo
- Source:
- Electrophoresis 2017 v.38 no.7 pp. 1016-1021
- ISSN:
- 0173-0835
- Subject:
- DNA; alleles; databases; electrophoresis; forensic sciences; genotyping; haplotypes; loci; males; polymerase chain reaction; traceability
- Abstract:
- ... A Y‐STR multiplex system has been developed with the purpose of complementing the widely used 17 Y‐STR haplotyping (AmpFlSTR Y Filer® PCR Amplification kit) routinely employed in forensic and population genetic studies. This new multiplex system includes six additional STR loci (DYS576, DYS481, DYS549, DYS533, DYS570, and DYS643) to reach the 23 Y‐STR of the PowerPlex® Y23 System. In addition, thi ...
- DOI:
- 10.1002/elps.201600313
- https://doi.org/10.1002/elps.201600313
- Author:
- Satomi Mizukami‐Murata; Katsuyuki Kishi‐Kadota; Takashi Nishida
- Source:
- Environmental toxicology 2016 v.31 no.11 pp. 1539-1551
- ISSN:
- 1520-4081
- Subject:
- Oryzias latipes; biosynthesis; body mass index; cholesterol; databases; egg production; females; gene expression; gene expression regulation; genes; gonadosomatic index; hydroxymethylglutaryl-CoA synthase; lanosterol; larvae; males; microarray technology; mitochondria; obesity; polyketides; reverse transcriptase polymerase chain reaction; sex reversal; terpenoids; transcriptomics
- Abstract:
- ... Here, we used physiological and transcriptomic analyses to evaluate the effects of 17β‐trenbolone (TB) on metabolism during the early life stage of medaka (Oryzias latipes). In the physiological experiments, sex reversal rates increased continuously in proportion to TB concentrations (2–100 ng/L), and were 100% (all males) in the 200 ng/L treatment group. TB caused a significant increase in the go ...
- DOI:
- 10.1002/tox.22158
- https://doi.org/10.1002/tox.22158
- Author:
- Mark A. Buchheim; Tobias Müller; Matthias Wolf
- Source:
- Plant gene 2017 v.10 pp. 45-50
- ISSN:
- 2352-4073
- Subject:
- Golenkinia; Sphaeropleales; algae; databases; genes; phylogeny; ribosomal DNA; topology
- Abstract:
- ... Using THESES db, the algae 18S rDNA sequence-structure database for inferring phylogenies, we reconstructed the phylogeny of a comprehensive sampling of sphaeroplealean green algae evaluated in the context of chlorophycean diversity. A review of the most recent assessments of chlorophycean phylogeny using sequence-only analyses further illustrates the contrast with results obtained from chlorophyc ...
- DOI:
- 10.1016/j.plgene.2017.05.005
- https://doi.org/10.1016/j.plgene.2017.05.005
- Author:
- Serge Aubert; Florian Boucher; Sébastien Lavergne; Julien Renaud; Philippe Choler
- Source:
- Alpine botany 2014 v.124 no.1 pp. 59-70
- ISSN:
- 1664-2201
- Subject:
- Internet; biogeography; databases; geographical distribution; mountains; new species
- Abstract:
- ... Cushion plants have long fascinated botanists for their ability to cope with extreme environments in most mountains and arctic regions of the world. One century ago, a first worldwide catalogue of species forming cushions was published by Hauri and Schröter (Bot Jahrb Syst Pflanzengesch Pflanzengeogr 50:618–656, 1914). Here, we defined a simplified typology of cushion plants and updated the worldw ...
- DOI:
- 10.1007/s00035-014-0127-x
- https://doi.org/10.1007/s00035-014-0127-x
33. 1990–2016 surface solar radiation variability and trend over the Piedmont region (northwest Italy)
- Author:
- Veronica Manara; Manuela Bassi; Michele Brunetti; Barbara Cagnazzi; Maurizio Maugeri
- Source:
- Theoretical and applied climatology 2019 v.136 no.3-4 pp. 849-862
- ISSN:
- 0177-798X
- Subject:
- altitude; autumn; data collection; databases; homogenization; piedmont; quality control; remote sensing; solar radiation; spring; winter; Italy
- Abstract:
- ... A new surface solar radiation database of 74 daily series is set up for the Piedmont region (northwest Italy) for the 1990–2016 period. All the series are subjected to a detailed quality control, homogenization and gap-filling procedure and are transformed into relative annual/seasonal anomaly series. Finally, a gridded version (0.5°×0.5°) of the database is generated. The resulting series show an ...
- DOI:
- 10.1007/s00704-018-2521-6
- https://doi.org/10.1007/s00704-018-2521-6
- Author:
- Chiara Roberta Girelli; Francesca Calò; Federica Angilè; Lucia Mazzi; Daniele Barbini; Francesco Paolo Fanizzi
- Source:
- Foods 2020 v.9 no.12 pp. -
- ISSN:
- 2304-8158
- Subject:
- classification; correlation; databases; extra-virgin olive oil; fat intake; foods; fraud; harvesting; markets; multivariate analysis; nuclear magnetic resonance spectroscopy; phenolic compounds; sampling; statistical models
- Abstract:
- ... During the last few years, the global demand for extra virgin olive oil (EVOO) is increased. Olive oil represents a significant percentage of world fat consumption determining an important development of its market. In this context, the problems related to counterfeiting and product fraud is becoming extremely relevant. Thus, the quality and authenticity control of EVOOs is nowadays mandatory. In ...
- DOI:
- 10.3390/foods9121797
- https://doi.org/10.3390/foods9121797
- Author:
- Elideth Florentino-Ramos; Nemesio Villa-Ruano; Diego Hidalgo-Martínez; Moisés Ramírez-Meraz; Reinaldo Méndez-Aguilar; Rodolfo Velásquez-Valle; L. Gerardo Zepeda-Vallejo; Nury Pérez-Hernández; Elvia Becerra-Martínez
- Source:
- Food research international 2019 v.121 pp. 12-19
- ISSN:
- 0963-9969
- Subject:
- Capsicum annuum; amino acids; antioxidants; ascorbic acid; bioavailability; cultivars; databases; discriminant analysis; free amino acids; hot peppers; human nutrition; metabolites; metabolomics; nuclear magnetic resonance spectroscopy; phenolic acids; phylogeny; principal component analysis; Mexico
- Abstract:
- ... Approximately 90% of the chili peppers consumed in the world are harvested in Mexico. The present article describes the untargeted 1H NMR-based metabolomic profiling of 11 cultivars of Capsicum annuum species which are routinely consumed worldwide. The metabolomic fingerprinting detected via 1H NMR contained 44 metabolites including sugars, amino acids, organic acids, polyphenolic acids and alcoho ...
- DOI:
- 10.1016/j.foodres.2019.03.025
- https://doi.org/10.1016/j.foodres.2019.03.025
- Author:
- Sugandh Singh; Prakash Chand Sharma
- Source:
- Food analytical methods 2022 v.15 no.1 pp. 157-171
- ISSN:
- 1936-9751
- Subject:
- Hippophae rhamnoides; beta-alanine; cosmetics; databases; dietary supplements; drugs; food safety; heat; humans; metabolites; metabolome; metabolomics; multivariate analysis; nuclear magnetic resonance spectroscopy; spermidine; Himalayan region; India
- Abstract:
- ... A comprehensive analysis of crucial metabolites in seabuckthorn (Hippophae rhamnoides L.) was conducted by analyzing the methanolic extract of berries originating from 37 geographical sites of the Indian Himalayas by using ¹H NMR-based metabolome profiling. The concentration of 103 metabolites was annotated, of which two, spermidine and beta-alanine, were reported for the first time in higher conc ...
- DOI:
- 10.1007/s12161-021-02100-6
- https://doi.org/10.1007/s12161-021-02100-6
- Author:
- Peixu Zhang; Weiguanliu Zhang; Yue Lang; Yan Qu; Jiafeng Chen; Li Cui
- Source:
- Infection, genetics, and evolution 2019 v.68 pp. 253-264
- ISSN:
- 1567-1348
- Subject:
- amino acid metabolism; biomarkers; carbohydrates; cerebrospinal fluid; databases; humans; magnetism; meningitis; metabolites; metabolome; metabolomics; models; nuclear magnetic resonance spectroscopy; patents; patients; principal component analysis; screening; tuberculosis
- Abstract:
- ... Tuberculosis meningitis (TBM) is the most severe form of tuberculosis, and currently lacks efficient diagnostic approaches. Metabolomics has the potential to differentiate patients with TBM from those with other forms of meningitis and meningitis-negative individuals. However, no systemic metabolomics research has compared the cerebrospinal fluid (CSF) of these patients.¹H nuclear magnetic resonan ...
- DOI:
- 10.1016/j.meegid.2019.01.003
- https://doi.org/10.1016/j.meegid.2019.01.003
- Author:
- Xingang Yuan; Liling Liu; Yalan Pu; Xuan Zhang; Xiaomeng He; Yuexian Fu
- Source:
- Food and chemical toxicology 2012 v.50 no.7 pp. 2270-2274
- ISSN:
- 0278-6915
- Subject:
- apoptosis; cell movement; cleft palate; corn oil; databases; energy metabolism; gene expression regulation; matrix-assisted laser desorption-ionization mass spectrometry; mice; palate; pregnancy; proteins; proteomics; tetrachlorodibenzo-p-dioxin; tissues; toxicology; two-dimensional gel electrophoresis
- Abstract:
- ... OBJECTIVE: To identify the differential protein pattern in 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) induced cleft palates using a proteomic approach. METHODS: At gestation day (GD) 12, TCDD (64g/kg; n=30) or corn oil control (n=30) was given to time-pregnant C57BL/6J mice by gavage. The anatomical, histological, proteomic changes in the palates of the fetal mice were studied on GD18. Total prote ...
- DOI:
- 10.1016/j.fct.2012.04.032
- https://doi.org/10.1016/j.fct.2012.04.032
- Author:
- Kamlendra Singh Bhadoriya; Mukesh C. Sharma; Shailesh V. Jain
- Source:
- Journal of Taibah University for Science 2015 v.9 no.4 pp. 521-530
- ISSN:
- 1658-3655
- Subject:
- RNA-directed DNA polymerase; aromatic compounds; biomedical research; correlation; databases; drug therapy; enzyme inhibitors; filters; hydrogen bonding; models; pharmacology; screening
- Abstract:
- ... Due to the AIDS crisis, development of new, selective and safe non-nucleoside reverse transcriptase inhibitors (NNRTIs) remains a high priority for medical research. The discovery of potential lead compounds by analogue based design studies was accomplished using 3D-QSAR and pharmacophore modelling of non-nucleoside reverse transcriptase inhibitors. A series of 24 diarylaniline analogues as NNRTIs ...
- DOI:
- 10.1016/j.jtusci.2014.12.005
- https://doi.org/10.1016/j.jtusci.2014.12.005
- Author:
- Izquierdo, Esther; Horvatovich, Peter; Marchioni, Eric; Aoude-Werner, Dalal; Sanz, Yolanda; Ennahar, Saïd
- Source:
- Electrophoresis 2009 v.30 no.6 pp. 949-956
- ISSN:
- 0173-0835
- Subject:
- Lactobacillus plantarum; adhesion; bacteria; bacterial adhesion; bacterial proteins; biomarkers; cell walls; databases; digestion; early selection; electrophoresis; gene overexpression; glyceraldehyde-3-phosphate dehydrogenase; molecular chaperones; mucins; probiotics; protein synthesis; proteome; proteomics
- Abstract:
- ... The identification of cell components involved in probiotic activities is a challenge in current probiotic research. In this work, a new approach based on proteomics as an analytical tool for the identification of characteristic protein profiles related to adhesion to mucin as a model probiotic property was used. Three Lactobacillus plantarum strains with different adhesion rates were used for pro ...
- DOI:
- 10.1002/elps.200800399
- https://doi.org/10.1002/elps.200800399
- Author:
- M. De La Fuente; A. Borrajo; J. Bermúdez; M. Lores; J. Alonso; M. López; M. Santalla; A.M. De Ron; C. Zapata; G. Alvarez
- Source:
- Journal of proteomics 2011 v.74 no.2 pp. 262-267
- ISSN:
- 1874-3919
- Subject:
- Phaseolus vulgaris; alpha-amylase; beans; carbohydrate metabolism; databases; gels; genome; humans; mass spectrometry; phaseolin; phenol; phytohemagglutinin; proteomics; seeds; stress response; two-dimensional gel electrophoresis
- Abstract:
- ... Common bean (Phaseolus vulgaris L.) is the most important grain legume for direct human consumption. Proteomic studies in legumes have increased significantly in the last years but few studies have been performed to date in P. vulgaris. We report here a proteomic analysis of bean seeds by two-dimensional electrophoresis (2-DE). Three different protein extraction methods (TCA–acetone, phenol and th ...
- DOI:
- 10.1016/j.jprot.2010.10.004
- PubMed:
- 20971221
- https://doi.org/10.1016/j.jprot.2010.10.004
- Author:
- Camila M. Costa; Marcelo V. Sousa; Carlos André O. Ricart; Jaime M. Santana; Antonio R.L. Teixeira; Peter Roepstorff; Sébastien Charneau
- Source:
- Journal of proteomics 2011 v.74 no.9 pp. 1652-1663
- ISSN:
- 1874-3919
- Subject:
- Chagas disease; Rhodnius; Trypanosoma cruzi; amino acid sequences; blood; databases; gene duplication; genes; hematophagous insects; proteins; proteomics; saliva; two-dimensional gel electrophoresis
- Abstract:
- ... The triatomine bugs are obligatory haematophagous organisms that act as vectors of Chagas disease by transmitting the protozoan Trypanosoma cruzi. Their feeding success is strongly related to salivary proteins that allow these insects to access blood by counteracting host haemostatic mechanisms. Proteomic studies were performed on saliva from the Amazonian triatomine bugs: Rhodnius brethesi and R. ...
- DOI:
- 10.1016/j.jprot.2011.02.022
- PubMed:
- 21362504
- https://doi.org/10.1016/j.jprot.2011.02.022
- Author:
- Daniel Klein; Christian Wolf; Christoph Schulz; Gabriele Weber-Blaschke
- Source:
- international journal of life cycle assessment 2015 v.20 no.4 pp. 556-575
- ISSN:
- 0948-3349
- Subject:
- bark; business enterprises; carbon; carbon footprint; carbon sequestration; databases; energy use and consumption; environmental impact; environmental product declaration; forest roads; forests; global warming; land use change; life cycle assessment; quantitative analysis; raw materials; site preparation; timber production; wood
- Abstract:
- ... PURPOSE: Life cycle assessment (LCA) techniques have been developed since the late 1960s in order to analyze environmental impacts of various products or companies. Although LCA techniques of forest production have been already conducted since the early 1990s, consistent and comprehensive LCA studies are still lacking for the forestry sector. In order to support better comparability between LCA st ...
- DOI:
- 10.1007/s11367-015-0847-1
- https://doi.org/10.1007/s11367-015-0847-1
- Author:
- Diana Ansorena; Andrea Echarte; Rebeca Ollé; Iciar Astiasarán
- Source:
- Food chemistry 2013 v.138 no.1 pp. 422-429
- ISSN:
- 0308-8146
- Subject:
- acid value; baked goods; chronic diseases; databases; dietary recommendations; food composition; lipid content; risk; trans fatty acids; Spain
- Abstract:
- ... Trans fatty acids (TFA) are strongly correlated with an increased risk of cardiovascular and other chronic diseases. Current dietary recommendations exclude bakery products from frequent consumption basically due to their traditionally high content of TFA.The aim of this work was to analyse the lipid profile of different bakery products currently commercialised in Spain and with a conventionally h ...
- DOI:
- 10.1016/j.foodchem.2012.10.096
- PubMed:
- 23265507
- https://doi.org/10.1016/j.foodchem.2012.10.096
- Author:
- Marianne Smith Edge; Mary Elizabeth Kunkel; Jennifer Schmidt; Constantina Papoutsakis
- Source:
- Journal of the Academy of Nutrition and Dietetics 2018 v.118 no.6 pp. 1106-1127.e9
- ISSN:
- 2212-2672
- Subject:
- adverse effects; allergenicity; antibiotic resistance; commercialization; crops; crossing; databases; food availability; food production; food safety; foods; genes; genetic engineering; health care workers; human health; humans; inflammation; ingredients; molecular biology; neoplasms; pesticide residues; pesticides; phenotype; plant breeders; recombinant DNA; risk; systematic review; United States
- Abstract:
- ... In the late 20th century, plant breeders began using molecular biology techniques such as recombinant DNA, also known as genetic engineering, along with traditional cross-breeding. Ten plant and one animal food have been approved for commercialization in the United States. Today, foods and ingredients from genetically engineered (GE) crops are present throughout the food supply, which has led to v ...
- DOI:
- 10.1016/j.jand.2017.08.005
- https://doi.org/10.1016/j.jand.2017.08.005
- Author:
- Yuan-Hsin Cheng; William E. Field; Roger Tormoehlen; Edward J. Sheldon
- Source:
- Journal of agricultural safety and health v.26 no.3 pp. 105-119
- ISSN:
- 1943-7846
- Subject:
- agricultural health and safety; databases; death; farms; health programs; tractors; trees; wood; youth; Indiana
- Abstract:
- ... Highlights1,412 farm-related fatalities have been documented in Indiana since 1970.There were 30.7 fatalities annually, with an average of 25.2 over the past ten years.Victims age 60 and older have increased slightly, accounting for about 48% of all documented fatalities.Fatalities involving youth under the age of 18 have decreased in frequency.Tractors accounted for 45% of all farm fatalities ove ...
- DOI:
- 10.13031/jash.13635
- https://doi.org/10.13031/jash.13635
- Author:
- E. Derisoud; A. Hankele; L. Jouneau; C. Dubois; D. Rousseau-Ralliard; M. Dahirel; L. Wimel; S. Ulbrich; P. Chavatte-Palmer
- Source:
- Reproduction, fertility, and development 2020 v.32 no.2 pp. 229-230
- ISSN:
- 1031-3613
- Subject:
- algorithms; biosynthesis; computer software; conception; dairy cattle; data collection; databases; diet; embryo (animal); enzymatic hydrolysis; fatty acid composition; foals; gas chromatography; gene expression regulation; genes; guanosine diphosphate; human chorionic gonadotropin; humans; industry; inflammation; lactation; leukotrienes; linear models; liquid chromatography; mammary glands; mannose; mares; metabolites; metabolomics; milk production; ovulation; palmitic acid; peptides; proteasome endopeptidase complex; proteomics; reproductive efficiency; semen; stallions; stearic acid; tandem mass spectrometry; trypsin; ubiquinones; ubiquitin; ultrasonics; uterus
- Abstract:
- ... In the equine industry, horse breeders aim to produce one foal per mare per year. Thus, mares are bred while nursing. In high-yielding dairy cattle, concurrent lactation and conception may affect embryo quality, but effects on uterine fluid (UF) quality are unknown. No data are available in horses. The aim of our study was to analyse the effect of nursing on protein, metabolite and fatty acid (FA) ...
- DOI:
- 10.1071/RDv32n2Ab202
- https://doi.org/10.1071/RDv32n2Ab202
- Author:
- Michael Ray; Hazel C Carney; Beth Boynton; Jessica Quimby; Sheilah Robertson; Kelly St Denis; Helen Tuzio; Bonnie Wright
- Source:
- Journal of feline medicine and surgery 2021 v.23 no.7 pp. 613-638
- ISSN:
- 1532-2750
- Subject:
- anesthesia; blood pressure; cats; clinical examination; databases; decision making; euthanasia; medicine; pain; patients; pet ownership; quality of life; surgery; veterinary medicine
- Abstract:
- ... The ‘2021 AAFP Feline Senior Care Guidelines’ are authored by a Task Force of experts in feline clinical medicine and serve as an update and extension of those published in 2009. They emphasize the individual patient evaluation and the process of aging, with references to other feline practice guidelines for a more complete discussion of specific diseases. Focusing on each cat encourages and empow ...
- DOI:
- 10.1177/1098612X211021538
- https://doi.org/10.1177/1098612X211021538
- Author:
- Guosheng Yang; M. Safiur Rahman; Hirofumi Tazoe; Jun Hu; Yang Shao; Masatoshi Yamada
- Source:
- Chemosphere 2019 v.225 pp. 388-394
- ISSN:
- 0045-6535
- Subject:
- accidents; cesium; databases; monitoring; nuclear power; power plants; radionuclides; riparian soils; rivers; sediments; soil sampling; tandem mass spectrometry; uranium
- Abstract:
- ... Almost 8 years after the Japanese Fukushima Daiichi Nuclear Power Plant (FDNPP) accident, data for 236U and 236U/238U have mainly remained limited to only a few heavily contaminated samples. In the present study, activities of 236U, 134Cs, and 137Cs, along with 234U, 235U, 238U, in 15 river bank soil and 10 river sediment samples, were measured by ICP-MS/MS and γ spectrometry. The 134Cs activities ...
- DOI:
- 10.1016/j.chemosphere.2019.03.061
- https://doi.org/10.1016/j.chemosphere.2019.03.061
- Author:
- Christoph Norbert; Hermann Armin; Wachter Helmut
- Source:
- BIO web of conferences 2015 v.5 pp. 02020
- ISSN:
- 2117-4458
- Subject:
- European Union; carbon dioxide; databases; ethanol; glycerol; isotope fractionation; magnetism; mass spectrometry; provenance; stable isotopes; sucrose; sugar beet; sugarcane; wines
- Abstract:
- ... The implementation of stable isotope applications in official food analyses began in 1990. At that time the first method to detect sucrose from sugar beet or sugar cane in wine by Deuterium-Nuclear Magnetic Resonance (2H-NMR) of ethanol, also known as SNIF-NMR®-Method became adopted officially by the European Commission. This was a milestone for an improved authentication of wines and other food s ...
- DOI:
- 10.1051/bioconf/20150502020
- https://doi.org/10.1051/bioconf/20150502020