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1. The G-Protein β Subunit AGB1 Promotes Hypocotyl Elongation through Inhibiting Transcription Activation Function of BBX21 in Arabidopsis

Author:
Li, Lian-cheng,   et al.   ; Xu, Dong-bei; Gao, Shi-qing; Ma, Ya-nan; Wang, Xiao-ting; Feng, Lu; Xu, Zhao-shi; Chen, Yao-feng; Chen, Ming; Ma, You-zhi;     Show all 10 Authors
Source:
Molecular plant 2017 v.10 no.9 pp. 1206-1223
ISSN:
1674-2052
Subject:
Arabidopsis thaliana; DNA; G-proteins; abscisic acid; binding capacity; hypocotyls; models; mutants; phenotype; plant development; transcription (genetics); transcription factors; transcriptional activation
Abstract:
... Hypocotyl development in Arabidopsis thaliana is regulated by light and endogenous hormonal cues, making it an ideal model to study the interplay between light and endogenous growth regulators. BBX21, a B-box (BBX)-like zinc-finger transcription factor, integrates light and abscisic acid signals to regulate hypocotyl elongation in Arabidopsis. Heterotrimeric G-proteins are pivotal regulators of pl ...
DOI:
10.1016/j.molp.2017.08.004

2. The NAC-like transcription factor SiNAC110 in foxtail millet (Setaria italica L.) confers tolerance to drought and high salt stress through an ABA independent signaling pathway

Author:
LI, Lian-cheng,   et al.   ; XIE, Li-na; CHEN, Ming; MIN, Dong-hong; FENG, Lu; XU, Zhao-shi; ZHOU, Yong-bin; XU, Dong-bei; MA, You-zhi; ZHANG, Xiao-hong;     Show all 10 Authors
Source:
Journal of integrative agriculture 2017 v.16 no.3 pp. 559-571
ISSN:
2095-3119
Subject:
Arabidopsis; RNA; Setaria italica; abscisic acid; apical meristems; biosynthesis; crops; drought; drought tolerance; gene expression regulation; gene overexpression; genes; genomics; homeostasis; nutrition; phylogeny; proline; protoplasts; roots; salinity; salt stress; seed germination; signal transduction; stress response; stress tolerance; surface area; transcription factors; transport proteins; water stress
Abstract:
... Foxtail millet (Setaria italica (L.) P. Beauv) is a naturally stress tolerant crop. Compared to other gramineous crops, it has relatively stronger drought and lower nutrition stress tolerance traits. To date, the scope of functional genomics research in foxtail millet (S. italic L.) has been quite limited. NAC (NAM, ATAF1/2 and CUC2)-like transcription factors are known to be involved in various b ...
DOI:
10.1016/S2095-3119(16)61429-6

3. Investigation of the ASR family in foxtail millet and the role of ASR1 in drought/oxidative stress tolerance

Author:
Li, Lian-Cheng,   et al.   ; Feng, Zhi-Juan; Xu, Zhao-Shi; Sun, Jiutong; Chen, Ming; Yang, Guang-Xiao; He, Guang-Yuan; Ma, You-Zhi;     Show all 8 Authors
Source:
Plant cell reports 2016 v.35 no.1 pp. 115-128
ISSN:
0721-7714
Subject:
drought tolerance; phylogeny; drought; genes; oxidative stress; bioenergy; homeostasis; Setaria italica; tissues; transcription factors; plant development; germination; gene overexpression; water content; root growth; abiotic stress; enzyme activity; tobacco; stress tolerance; crop models; survival rate; stress response; ripening; abscisic acid; chlorophyll; crops
Abstract:
... KEY MESSAGE : Six foxtail millet ASR genes were regulated by various stress-related signals. Overexpression of ASR1 increased drought and oxidative tolerance by controlling ROS homeostasis and regulating oxidation-related genes in tobacco plants. Abscisic acid stress ripening (ASR) proteins with ABA/WDS domains constituted a class of plant-specific transcription factors, playing important roles in ...
DOI:
10.1007/s00299-015-1873-y

4. Overexpression of the autophagy-related gene SiATG8a from foxtail millet (Setaria italica L.) confers tolerance to both nitrogen starvation and drought stress in Arabidopsis

Author:
Li, Lian-cheng,   et al.   ; Li, Wei-wei; Chen, Ming; Zhong, Li; Liu, Jia-ming; Xu, Zhao-shi; Zhou, Yong-Bin; Guo, Chang-Hong; Ma, You-Zhi;     Show all 9 Authors
Source:
Biochemical and biophysical research communications 2015 v.468 pp. 800-806
ISSN:
0006-291X
Subject:
Arabidopsis; Setaria italica; autophagy; biogeochemical cycles; chlorophyll; crops; cytoplasm; drought; eukaryotic cells; gene overexpression; genes; genetic transformation; leaves; nitrogen; nitrogen content; plant stress; proline; protein content; starvation; stems; stress response; stress tolerance; survival rate; transgenic plants; water stress
Abstract:
... Autophagy is an evolutionarily conserved biological process in all eukaryotes for the degradation of intracellular components for nutrient recycling. Autophagy is known to be involved in responses to low nitrogen stress in Arabidopsis. Foxtail millet has strong abiotic stress resistance to both low nutrient and drought stress. However, to date, there have only been a few genes reported to be relat ...
DOI:
10.1016/j.bbrc.2015.11.035

5. G-protein β subunit AGB1 positively regulates salt stress tolerance in Arabidopsis

Author:
LI, Lian-cheng,   et al.   ; MA, Ya-nan; CHEN, Ming; XU, Dong-bei; FANG, Guang-ning; WANG, Er-hui; GAO, Shi-qing; XU, Zhao-shi; ZHANG, Xiao-hong; MIN, Dong-hong; MA, You-zhi;     Show all 11 Authors
Source:
Journal of integrative agriculture 2015 v.14 no.2 pp. 314-325
ISSN:
2095-3119
Subject:
Arabidopsis; G-protein coupled receptors; G-proteins; biosynthesis; chlorophyll; cold; cotyledons; eukaryotic cells; gene expression regulation; genes; germination; heat; homeostasis; malondialdehyde; mutants; oxidative stress; peroxidase; phenotype; proline; salt stress; salt tolerance; seedlings; sodium; sodium chloride; stress response; stress tolerance; survival rate; transcription (genetics)
Abstract:
... The heterotrimeric GTP-binding proteins (G-proteins) in eukaryotes consisted of α, β and γ subunits and are important in molecular signaling by interacting with G-protein-coupled receptors (GPCR), on which to transduce signaling into the cytoplast through appropriate downstream effectors. However, downstream effectors regulated by the G-proteins in plants are currently not well defined. In this st ...
DOI:
10.1016/S2095-3119(14)60777-2

6. ABI-like transcription factor gene TaABL1 from wheat improves multiple abiotic stress tolerances in transgenic plants

Author:
Li, Lian-Cheng,   et al.   ; Xu, Dong-Bei; Gao, Shi-Qing; Ma, You-Zhi; Xu, Zhao-Shi; Zhao, Chang-Ping; Tang, Yi-Miao; Li, Xue-Yin; Chen, Yao-Feng; Chen, Ming;     Show all 10 Authors
Source:
Functional & integrative genomics 2014 v.14 no.4 pp. 717-730
ISSN:
1438-793X
Subject:
Southern blotting; abscisic acid; binding proteins; breeding; cold stress; corn; drought; gene expression regulation; gene overexpression; genes; leaves; leucine zipper; mesophyll; phylogeny; promoter regions; rice; roots; stems; stomatal movement; transcription factors; transgenic plants; water stress; wheat
Abstract:
... The phytohormone abscisic acid (ABA) plays crucial roles in adaptive responses of plants to abiotic stresses. ABA-responsive element binding proteins (AREBs) are basic leucine zipper transcription factors that regulate the expression of downstream genes containing ABA-responsive elements (ABREs) in promoter regions. A novel ABI-like (ABA-insensitive) transcription factor gene, named TaABL1, contai ...
DOI:
10.1007/s10142-014-0394-z
PubMed:
25344442

7. Genome-Wide Analysis of the C3H Zinc Finger Transcription Factor Family and Drought Responses of Members in Aegilops tauschii

Author:
Li, Lian-Cheng,   et al.   ; Jiang, An-Long; Xu, Zhao-Shi; Zhao, Guang-Yao; Cui, Xiao-Yu; Chen, Ming; Ma, You-Zhi;     Show all 7 Authors
Source:
Plant molecular biology reporter 2014 v.32 no.6 pp. 1241-1256
ISSN:
0735-9640
Subject:
Aegilops tauschii; Arabidopsis; abiotic stress; cell membranes; drought; drought tolerance; gene overexpression; genes; genomics; germination; phylogeny; promoter regions; protoplasts; root growth; stress tolerance; transcription factors; transcriptional activation; transcriptome; yeasts; zinc finger motif
Abstract:
... Transcription factors regulate gene expression in response to various external and internal cues by activating or suppressing downstream genes. In this study, a comprehensive computational analysis identified 36 C3H zinc finger family genes in Aegilops tauschii. Phylogenetic analysis divided the C3H zinc finger family into seven subfamilies. According to a de novo transcriptome assembly, ten C3H z ...
DOI:
10.1007/s11105-014-0719-z

8. A wheat PI4K gene whose product possesses threonine autophophorylation activity confers tolerance to drought and salt in Arabidopsis

Author:
Li, Lian-Cheng,   et al.   ; Liu, Pei; Xu, Zhao-Shi; Pan-Pan, Lu; Hu, Di; Chen, Ming; Ma, You-Zhi;     Show all 7 Authors
Source:
Journal of experimental botany 2013 v.64 no.10 pp. 2915-2927
ISSN:
0022-0957
Subject:
seedling growth; drought tolerance; wheat; drought; polyethylene glycol; genes; threonine; Triticum aestivum; plasma membrane; transcriptomics; Arabidopsis; gene overexpression; root growth; ubiquitin; salt stress; stress tolerance; salt tolerance; seed germination; proteinases; stress response; mutants; abscisic acid
Abstract:
... Phosphoinositides are involved in regulation of recruitment and activity of signalling proteins in cell membranes. Phosphatidylinositol (PI) 4-kinases (PI4Ks) generate PI4-phosphate the precursor of regulatory phosphoinositides. No type II PI4K research on the abiotic stress response has previously been reported in plants. A stress-inducible type II PI4K gene, named TaPI4KIIγ, was obtained by de n ...
DOI:
10.1093/jxb/ert133
PubMed:
23682116
PubMed Central:
PMC3741686

9. Isolation and identification of a wheat gene encoding a zinc finger protein (TaZnFP) responsive to abiotic stresses

Author:
Li, Lian-Cheng,   et al.   ; Min, Dong-Hong; Zhao, Yue; Huo, Dong-Ying; Chen, Ming; Xu, Zhao-Shi; Ma, You-Zhi;     Show all 7 Authors
Source:
Acta physiologiae plantarum 2013 v.35 no.5 pp. 1597-1604
ISSN:
0137-5881
Subject:
wheat; drought; isoelectric point; open reading frames; amino acids; Triticum aestivum; cytoplasm; mesophyll; introns; Arabidopsis; gene overexpression; sodium chloride; suppression subtractive hybridization; zinc finger motif; cold; salt stress; stress tolerance; protoplasts; proteins; abscisic acid
Abstract:
... Zinc finger protein is one of the proteins with finger-like domains. CCCH-type zinc finger proteins involved in plant stress tolerance are poorly understood. In this paper, a novel CCCH-type zinc finger protein gene TaZnFP was isolated during analysis of an abiotic stress suppression subtractive hybridization expression library from wheat (Triticum aestivum L.). The TaZnFP gene contains a 1,533 bp ...
DOI:
10.1007/s11738-012-1202-9

10. Characterization of Ethylene Receptors and Their Interactions with GmTPR – A Novel Tetratricopeptide Repeat Protein (TPR) in Soybean (Glycine max L.)

Author:
LI, Lian-cheng,   et al.   ; NIU, Yan-yan; CHEN, Ming; CHEN, Xue-ping; MA, You-zhi; XU, Zhao-shi;     Show all 6 Authors
Source:
Journal of integrative agriculture 2013 v.12 no.4 pp. 571-581
ISSN:
2095-3119
Subject:
Arabidopsis; Glycine max; databases; ethylene; genes; growth and development; phylogeny; promoter regions; protein structure; receptors; signal transduction; soybeans; transcription factors
Abstract:
... Ethylene receptors play important roles not only in regulation of growth and development but also in response to environmental stimuli of plants. However, there are few reports on ethylene receptors in soybean. In this article, putative ethylene receptors of soybean were searched from soybean genomic database (http://www.phytozome.net/search.php) and analyzed. The ethylene receptor gene family in ...
DOI:
10.1016/S2095-3119(13)60274-9

11. Flow Karyotyping of Wheat Addition Line “T240” with a Haynaldia villosa 6VS Telosome

Author:
Li, Lian-cheng,   et al.   ; Guo, Dong-wei; Min, Dong-hong; Xu, Zhao-shi; Chen, Ming; Ashraf, Muhammad; Ghafoor, Abdul; Ma, You-zhi;     Show all 8 Authors
Source:
Plant molecular biology reporter 2013 v.31 no.2 pp. 289-295
ISSN:
0735-9640
Subject:
DNA; DNA libraries; Dasypyrum villosum; chromosome addition; chromosomes; fluorescence in situ hybridization; homogenizers; karyotyping; metaphase; root tips; trifluralin; wheat
Abstract:
... To construct a chromosome-specific DNA library of chromosome 6VS from Haynaldia villosa, a wheat alien chromosome addition line T240 with a 6VS chromosome arm and its parental common wheat cv. CA921 were used to optimize protocols for preparing chromosome suspension amenable to flow sorting of the 6VS chromosome. Our results showed that root tips incubated sequentially in Hogland’s solution contai ...
DOI:
10.1007/s11105-012-0492-9

12. A Novel Quick Method for Detecting Target DNA Binding Sites of Protein

Author:
LI, Lian-Cheng,   et al.   ; ZHU, Ming; WEI, Wei; CHEN, Ming; ZHANG, Xian-Sheng; XU, Zhao-Shi; MA, You-Zhi;     Show all 7 Authors
Source:
Acta agronomica sinica 2012 v.37 no.12 pp. 2167-2171
ISSN:
1875-2780
Subject:
DNA; DNA probes; binding proteins; binding sites; capillary electrophoresis; deoxyribonuclease I; fluorescence; genes; growth and development; isotopes; plant growth; polyacrylamide gel electrophoresis; restriction endonucleases; stress response; transcription (genetics); transcription factors
Abstract:
... DREB (dehydration responsive element binding protein) transcription factors play important roles in stress response and regulation of plant growth and development. In general, the traditional method of DNase I foot-printing is used to identify DNA binding of transcription factor. The DNA probes were labeled with isotope and then polyacrylamide gel electrophoresis was performed to separately digest ...
DOI:
10.1016/S1875-2780(11)60056-4

13. Induction Kinetics of a Novel Stress-related LEA Gene in Wheat

Author:
Li, Lian-Cheng,   et al.   ; Min, Dong-Hong; Zhang, Xiao-Hong; Xu, Zhao-Shi; Zhao, Yue; Chen, Yang; Chen, Ming; Ma, You-Zhi;     Show all 8 Authors
Source:
Plant molecular biology reporter 2012 v.30 no.6 pp. 1313-1321
ISSN:
0735-9640
Subject:
amino acid motifs; amino acids; bacteriophages; cDNA libraries; cell membranes; clones; complementary DNA; crop quality; cytoplasm; drought; genes; messenger RNA; nuclear localization signals; open reading frames; oxidation; prediction; promoter regions; proteins; salts; seedlings; sequence alignment; stems; temperature; thermal stability; ultraviolet radiation; water stress; wheat
Abstract:
... Drought, high-salt, and low-temperature are major constraints to yield and quality of crops. Late embryogenesis abundant proteins (LEAs), characterized by high hydrophilic and thermal stabilities, stabilize the cell membrane structure and prevent oxidation. LEA genes mediate responses to abiotic stresses such as drought, salt, low-temperature, or ultraviolet radiation. In this study, TaLEA4, a Gro ...
DOI:
10.1007/s11105-012-0446-2

14. Overexpression of soybean GmCBL1 enhances abiotic stress tolerance and promotes hypocotyl elongation in Arabidopsis

Author:
Li, Lian-Cheng,   et al.   ; Li, Zhi-Yong; Xu, Zhao-Shi; He, Guang-Yuan; Yang, Guang-Xiao; Chen, Ming; Ma, You-Zhi;     Show all 7 Authors
Source:
Biochemical and biophysical research communications 2012 v.427 no.4 pp. 731-736
ISSN:
0006-291X
Subject:
Arabidopsis; abiotic stress; drought; gene expression; genes; gibberellins; hypocotyls; plant hormones; plant stress; proteins; roots; seedlings; soybeans; stress tolerance; transgenic plants
Abstract:
... Although extensive studies and remarkable progress have been made with Arabidopsis calcineurin B-like proteins (CBLs), knowledge of their functions in other plant species is still limited. Here we isolated gene GmCBL1 from soybean, a homolog of AtCBL1 in Arabidopsis. GmCBL1 was differentially induced by multiple abiotic stress and plant hormones, and its transcripts were abundant in seedlings and ...
DOI:
10.1016/j.bbrc.2012.09.128

15. A mutation in Arabidopsis BSK5 encoding a brassinosteroid-signaling kinase protein affects responses to salinity and abscisic acid

Author:
Li, Lian-Cheng,   et al.   ; Li, Zhi-Yong; Xu, Zhao-Shi; He, Guang-Yuan; Yang, Guang-Xiao; Chen, Ming; Ma, You-Zhi;     Show all 7 Authors
Source:
Biochemical and biophysical research communications 2012 v.426 no.4 pp. 522-527
ISSN:
0006-291X
Subject:
Arabidopsis; abiotic stress; abscisic acid; brassinosteroids; drought; genes; mutants; mutation; physiological response; protein kinases; proteins; salinity; salt tolerance; signal transduction; tissues
Abstract:
... As the most recently characterized group of plant hormones, brassinosteroids (BR) are involved in a number of physiological responses. Although many key components of the BR signaling pathway have been isolated and characterized, there is little information on detailed characterization of brassinosteroid-signaling kinase (BSK) proteins. In this study, Arabidopsis BSK5 was isolated and functionally ...
DOI:
10.1016/j.bbrc.2012.08.118

16. Functions and Application of the AP2/ERF Transcription Factor Family in Crop ImprovementF

Author:
Li, Lian-Cheng,   et al.   ; Xu, Zhao-Shi; Chen, Ming; Ma, You-Zhi;     Show all 4 Authors
Source:
Journal of integrative plant biology 2011 v.53 no.7 pp. 570-585
ISSN:
1672-9072
Subject:
drought; engineering; freezing; gene interaction; genes; plant development; stress response; transcription factors; transgenic plants
Abstract:
... You-Zhi Ma(Corresponding author) Plants have acquired sophisticated stress response systems to adapt to changing environments. It is important to understand plants' stress response mechanisms in the effort to improve crop productivity under stressful conditions. The AP2/ERF transcription factors are known to regulate diverse processes of plant development and stress responses. In this study, the m ...
DOI:
10.1111/j.1744-7909.2011.01062.x
PubMed:
21676172

17. A cotton (Gossypium hirsutum) DRE-binding transcription factor gene, GhDREB, confers enhanced tolerance to drought, high salt, and freezing stresses in transgenic wheat

Author:
Li, Lian-Cheng,   et al.   ; Gao, Shi-Qing; Chen, Ming; Xia, Lian-Qin; Xiu, Hui-Jun; Xu, Zhao-Shi; Zhao, Chang-Ping; Cheng, Xian-Guo; Ma, You-Zhi;     Show all 9 Authors
Source:
Plant cell reports 2009 v.28 no.2 pp. 301-311
ISSN:
0721-7714
Subject:
Gossypium hirsutum; RNA; Southern blotting; Triticum aestivum; binding proteins; cDNA libraries; chlorophyll; complementary DNA; cotton; drought; drought tolerance; freezing; genes; genetic engineering; leaves; phenotype; polymerase chain reaction; seedlings; stress tolerance; sugars; transcription (genetics); transcription factors; transgenic plants; wheat; yeasts
Abstract:
... A cotton (G. hirsutum L.) dehydration responsive element binding protein gene, GhDREB, which encodes a 153 amino acid protein containing a conserved AP2/EREBP domain, was isolated from the cDNA library of cotton cv. Simian 3 by a yeast one-hybrid system. RNA blot analysis showed that the GhDREB gene was induced in cotton seedlings by drought, high salt and cold stresses. An electrophoretic mobilit ...
DOI:
10.1007/s00299-008-0623-9
PubMed:
19005655

18. Isolation and functional characterization of HvDREB1--a gene encoding a dehydration-responsive element binding protein in Hordeum vulgare

Author:
Li, Lian-Cheng,   et al.   ; Xu, Zhao-Shi; Ni, Zhi-Yong; Li, Zhi-Yong; Chen, Ming; Gao, Dong-Yao; Yu, Xiu-Dao; Liu, Pei; Ma, You-Zhi;     Show all 9 Authors
Source:
Journal of plant research 2009 v.122 no.1 pp. 121-130
ISSN:
0918-9440
Subject:
Arabidopsis thaliana; Hordeum vulgare; abscisic acid; barley; binding proteins; drought; gene overexpression; leaves; mutants; reporter genes; salt stress; salt tolerance; seedlings; transcription factors; transcriptional activation; yeasts
Abstract:
... A gene encoding Hordeum vulgare dehydration-responsive element binding protein 1 (HvDREB1), a member of the A-2 subgroup of the DREB subfamily, was isolated from barley seedlings. A subcellular localization assay revealed accumulation of HvDREB1 protein in the nucleus. As a trans-acting factor, HvDREB1 was able to bind to DRE/CRT elements and transactivate reporter gene expression in yeast cells. ...
DOI:
10.1007/s10265-008-0195-3
PubMed:
19067111

19. Isolation and identification of two genes encoding leucine-rich repeat (LRR) proteins differentially responsive to pathogen attack and salt stress in tobacco

Author:
Li, Lian-Cheng,   et al.   ; Xu, Zhao-Shi; Xiong, Teng-Fei; Ni, Zhi-Yong; Chen, Xue-Ping; Chen, Ming; Gao, Dong-Yao; Yu, Xiu-Dao; Liu, Pei; Ma, You-Zhi;     Show all 10 Authors
Source:
Plant science 2009 v.176 no.1 pp. 38-45
ISSN:
0168-9452
Subject:
Nicotiana tabacum; tobacco; plant proteins; molecular cloning; complementary DNA; sequence analysis; messenger RNA; promoter regions; gene expression regulation; cell walls; plasma membrane; salt stress; Pseudomonas syringae pv. tabaci; plant pathogenic bacteria; Tobacco mosaic virus
Abstract:
... Leucine-rich repeat proteins (LRRs) play important roles in signal perception and activation of defense responses. We isolated two new LRR genes, NtLRR1 and NtLRR2, in tobacco (Nicotiana tabacum). NtLRR1 and NtLRR2 are characterized by 9 and 3 LRR domains, respectively. The phylogenetic relationships show that NtLRR1 and NtLRR2 belong to different subfamilies of the polygalacturonase inhibitor pro ...
DOI:
10.1016/j.plantsci.2008.09.004

20. W55a Encodes a Novel Protein Kinase That Is Involved in Multiple Stress Responses

Author:
Li, Lian-Cheng,   et al.   ; Xu, Zhao-Shi; Liu, Li; Ni, Zhi-Yong; Liu, Pei; Chen, Ming; Chen, Yao-Feng; Ma, You-Zhi;     Show all 8 Authors
Source:
Journal of integrative plant biology 2009 v.51 no.1 pp. 58-66
ISSN:
1672-9072
Subject:
Arabidopsis; Oryza sativa; Triticum aestivum; abscisic acid; active sites; amino acid sequences; amino acids; cDNA libraries; chromosomes; cold stress; complementary DNA; drought; drought tolerance; ethylene; gene overexpression; leaves; messenger RNA; methyl jasmonate; open reading frames; phylogeny; protein kinases; rapid amplification of cDNA ends; reverse transcriptase polymerase chain reaction; rice; roots; salicylic acid; seedlings; signal transduction; stems; stress response; transgenic plants; wheat
Abstract:
... Protein kinases play crucial roles in response to external environment stress signals. A putative protein kinase, W55a, belonging to SNF1-related protein kinase 2 (SnRK2) subfamily, was isolated from a cDNA library of drought-treated wheat seedlings. The entire length of W55a was obtained using rapid amplification of 5' cDNA ends (5'-RACE) and reverse transcription-polymerase chain reaction(RT-PCR ...
DOI:
10.1111/j.1744-7909.2008.00776.x
PubMed:
19166495