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- Author:
- Khanal, Jhabindra; Lim, Dae Young; Tayara, Hilal; Chong, Kil To
- Source:
- Genomics 2021 v.113 no.1 pp. 582-592
- ISSN:
- 0888-7543
- Subject:
- Fragaria vesca, etc ; DNA; Rosa chinensis; artificial intelligence; bioinformatics; epigenetics; eukaryotic cells; genome; genomics; inheritance (genetics); models; nucleotide sequences; nucleotides; physicochemical properties; prediction; prokaryotic cells; Show all 16 Subjects
- Abstract:
- ... DNA N6-methyladenine (6 mA) is an epigenetic modification that plays a vital role in a variety of cellular processes in both eukaryotes and prokaryotes. Accurate information of 6 mA sites in the Rosaceae genome may assist in understanding genomic 6 mA distributions and various biological functions such as epigenetic inheritance. Various studies have shown the possibility of identifying 6 mA sites ...
- DOI:
- 10.1016/j.ygeno.2020.09.054
-
https://dx.doi.org/10.1016/j.ygeno.2020.09.054
- Author:
- Michuda, Aleksandr; Goodhue, Rachael E.; Hoffmann, Mark; Fennimore, Steven A.
- Source:
- Agronomy 2021 v.11 no.1
- ISSN:
- 2073-4395
- Subject:
- Fragaria ananassa, etc ; additives; agronomy; coasts; costs and returns; disinfestation; economic sustainability; field experimentation; income; mathematical models; mustard oil cake; organic production; pests; prediction; production technology; soil; steam; strawberries; temperature; testing; California; Show all 21 Subjects
- Abstract:
- ... Pre-plant methods for managing soil-borne pests and diseases are an important priority for many agricultural production systems. This study investigates whether the application of steam is an economically sustainable pre-plant soil disinfestation technique for organic and conventional strawberry (Fragaria ananassa) production in California’s Central Coast region. We analyze net returns from field ...
- DOI:
- 10.3390/agronomy11010149
-
http://dx.doi.org/10.3390/agronomy11010149
- Author:
- Mehmood, Nasir; Yuan, Yuan; Ali, Mohammed; Ali, Muhammad; Iftikhar, Junaid; Cheng, Chunzhen; Lyu, Meiling; Wu, Binghua
- Source:
- Phytochemistry 2021 v.181 pp. 112590
- ISSN:
- 0031-9422
- Subject:
- Fragaria nilgerrensis, etc ; Glomerella cingulata; anthracnose; autoimmunity; fungi; genes; infection; leaves; metabolism; metabolites; models; monoterpenoids; pathogens; plant biochemistry; quantitative polymerase chain reaction; research; sesquiterpenoids; signal transduction; strawberries; terpene synthases; transcription (genetics); transcriptome; Show all 22 Subjects
- Abstract:
- ... Modern strawberry production is often threatened by microbe pathogens. Anthracnose is among the most prominent fungal disease caused mainly by Colletotrichum gloeosporioides and leads to large-scale losses both in quality and yield. Little is known regarding the mechanisms underlying the genetics in the strawberry-C. gloeosporioides interaction. In the current research, a wild accession ‘Fragaria ...
- DOI:
- 10.1016/j.phytochem.2020.112590
-
https://dx.doi.org/10.1016/j.phytochem.2020.112590
- Author:
- Dzhanfezova, Tsaneta; Barba-Espín, Gregorio; Müller, Renate; Joernsgaard, Bjarne; Hegelund, Josefine Nymark; Madsen, Bjoern; Larsen, Dorthe H.; Martínez Vega, Mabel; Toldam-Andersen, Torben Bo
- Source:
- Food bioscience 2020 v.36 pp. 100620
- ISSN:
- 2212-4292
- Subject:
- Fragaria ananassa; Fragaria vesca, etc ; anthocyanins; antioxidant activity; breeding programs; color; cultivars; cyanidin; dyes; growing season; iron; pelargonidin; plant breeding; screening; strawberries; Show all 15 Subjects
- Abstract:
- ... Screening of strawberry anthocyanin composition and antioxidant capacities are important in the characterization and development of sources of natural colors. Here, Fragaria vesca (wild strawberry) and three commercial (cultivars ‘Elsanta’, ‘Korona’ and ‘Honeyoe’) and 14 non-commercial cultivars of Fragaria × ananassa Duch. were characterized in terms of anthocyanin content and composition, total ...
- DOI:
- 10.1016/j.fbio.2020.100620
-
https://dx.doi.org/10.1016/j.fbio.2020.100620
- Author:
- Lee, Ye Rin; Kim, Jinhee; Lee, Sun Yi; Lee, Jundae
- Source:
- Horticulture, environment and biotechnology 2020 v.61 no.2 pp. 371-383
- ISSN:
- 2211-3452
- Subject:
- Fragaria ananassa; Fragaria vesca, etc ; chromosome mapping; cultivars; diploidy; genetic distance; genome; genomics; homozygosity; horticultural crops; linkage groups; loci; melting; microsatellite repeats; octaploidy; oligodeoxyribonucleotides; single nucleotide polymorphism; strawberries; Show all 18 Subjects
- Abstract:
- ... The octoploid strawberry (Fragaria × ananassa Duch.) is one of the most important horticultural crops in the world. However, few genomic studies have been performed in this plant due to its polyploidy nature and complex genome. In this work, we developed diallelic single-nucleotide polymorphism (SNP) markers using next-generation resequencing data and high-resolution melting (HRM) analysis. We als ...
- DOI:
- 10.1007/s13580-019-00223-8
-
http://dx.doi.org/10.1007/s13580-019-00223-8
- Author:
- Hasan, Md. Mehedi; Manavalan, Balachandran; Khatun, Mst. Shamima; Kurata, Hiroyuki
- Source:
- International journal of biological macromolecules 2020 v.157 pp. 752-758
- ISSN:
- 0141-8130
- Subject:
- Fragaria vesca, etc ; DNA; DNA replication; Rosa chinensis; bioinformatics; chromosomes; data collection; epigenetics; genome; nucleotide sequences; prediction; Show all 11 Subjects
- Abstract:
- ... One of the most important epigenetic modifications is N4-methylcytosine, which regulates many biological processes including DNA replication and chromosome stability. Identification of N4-methylcytosine sites is pivotal to understand specific biological functions. Herein, we developed the first bioinformatics tool called i4mC-ROSE for identifying N4-methylcytosine sites in the genomes of Fragaria ...
- DOI:
- 10.1016/j.ijbiomac.2019.12.009
-
https://dx.doi.org/10.1016/j.ijbiomac.2019.12.009
- Author:
- Siebeneichler, Tatiane Jéssica; Crizel, Rosane Lopes; Camozatto, Gustavo Henrique; Paim, Bruna Trindade; da Silva Messias, Rafael; Rombaldi, César Valmor; Galli, Vanessa
- Source:
- Food chemistry 2020 v.317 pp. 126407
- ISSN:
- 0308-8146
- Subject:
- Fragaria ananassa, etc ; abscisic acid; chemical composition; firmness; fruits; mannitol; postharvest storage; ripening; storage time; strawberries; sucrose; Show all 11 Subjects
- Abstract:
- ... In this study, we compared the chemical composition of strawberry (Fragaria × ananassa) fruits that were ripened in vivo (attached to plant) to those ripened during postharvest storage. The effects of the application of abscisic acid (ABA) and sucrose on the postharvest ripening were also evaluated. The results suggested that the postharvest ripening process was dependent on the signal triggered b ...
- DOI:
- 10.1016/j.foodchem.2020.126407
-
https://dx.doi.org/10.1016/j.foodchem.2020.126407
- Author:
- Watson, Tristan T.; Noling, Joseph W.; Desaeger, Johan A.
- Source:
- Crop protection 2020 v.132 pp. 105108
- ISSN:
- 0261-2194
- Subject:
- Fragaria ananassa, etc ; Belonolaimus longicaudatus; farms; fluopyram; growing season; nematicides; pests; population density; soil; strawberries; vigor; Florida; Show all 12 Subjects
- Abstract:
- ... The sting nematode (Belonolaimus longicaudatus) is one of the most economically damaging pests of strawberry in Florida. In this study we evaluated in-season application of fluopyram for management of B. longicaudatus populations at nine commercial strawberry farms. In-crop application of fluopyram reduced B. longicaudatus population densities in soil by the end of the growing season in four out o ...
- DOI:
- 10.1016/j.cropro.2020.105108
-
https://dx.doi.org/10.1016/j.cropro.2020.105108
- Author:
- Fu, Yu; Zhang, Xiaofang; Liu, Shijiahui; Hu, Kelin; Wu, Xuehong
- Source:
- Canadian journal of plant pathology 2020 v.42 no.2 pp. 235-242
- ISSN:
- 1715-2992
- Subject:
- Fragaria ananassa, etc ; Alternaria alternata; Alternaria tenuissima; disease incidence; foliar diseases; leaves; spores; strawberries; China; Show all 9 Subjects
- Abstract:
- ... Strawberry black spot caused by Alternaria is an important foliar disease. In 2016, strawberry leaves with severe black spot lesions were collected from eight districts of Beijing municipality in China. Molecular and morphological criteria were matched to identify the Alternaria species inciting strawberry black spot in Beijing. A total of 102 Alternaria isolates from diseased strawberry leaves we ...
- DOI:
- 10.1080/07060661.2019.1662851
-
http://dx.doi.org/10.1080/07060661.2019.1662851
- Author:
- Zdorovenko, Evelina L.; Kadykova, Alexandra A.; Shashkov, Alexander S.; Kiseleva, Elena P.; Savich, Victoria V.; Novik, Galina I.
- Source:
- Carbohydrate research 2020 v.489 pp. 107932
- ISSN:
- 0008-6215
- Subject:
- Fragaria ananassa, etc ; O-antigens; Pseudomonas koreensis; Pseudomonas oryzihabitans; leaves; nuclear magnetic resonance spectroscopy; strawberries; sugars; Show all 8 Subjects
- Abstract:
- ... Two Pseudomonas strains were isolated from the strawberry leaves. The O-antigens were obtained using phenol-water method and mild acid degradation. The following structures of the O-polysaccharides were established by sugar analysis and 2D NMR spectroscopy: OPS of Pseudomonas koreensis BIM B-970G →3)-α-D-FucNAcp-(1 → 2)-β-D-Quip3NAc-(1 → 3)-α-L-6dTalp4OAc-(1→ OPS of Pseudomonas oryzihabitans BIM B ...
- DOI:
- 10.1016/j.carres.2020.107932
-
https://dx.doi.org/10.1016/j.carres.2020.107932
- Author:
- Yu, Jialin; Boyd, Nathan S.
- Source:
- Weed technology 2020 v.34 no.4 pp. 619-623
- ISSN:
- 1550-2740
- Subject:
- Fragaria ananassa, etc ; diquat; field experimentation; glufosinate; growers; leaves; paraquat; regression analysis; strawberries; weeds; Florida; Show all 11 Subjects
- Abstract:
- ... Florida strawberry growers apply the nonselective herbicide paraquat for crop termination. Alternative herbicides are desirable because of recent label restrictions on paraquat use and the occurrence of three paraquat-resistant weed species found in strawberry fields. Field experiments were conducted at the Gulf Coast Research and Education Center at Balm, FL, to compare the efficacy of diquat, pa ...
- DOI:
- 10.1017/wet.2020.20
-
http://dx.doi.org/10.1017/wet.2020.20
- Author:
- Hu, Jiangtao; Li, Yali; Liu, Ya; Kang, Dong Il; Wei, Hao; Jeong, Byoung Ryong
- Source:
- Agriculture (Basel) 2020 v.10 no.1
- ISSN:
- 2077-0472
- Subject:
- Fragaria ananassa, etc ; hydrogen peroxide; hydrogen sulfide; strawberries; sugar content; sugars; superoxide dismutase; transplant production; Show all 8 Subjects
- Abstract:
- ... Hydrogen sulfide (H₂S) is endogenously produced in plant cells and plays an essential role in root development. Given its potential for future agricultural applications, the optimal concentration of sodium hydrosulfide (NaHS, an H₂S donor) and the potential mechanisms for root development in the strawberry ‘Seolhyang’ were investigated in this study. The results showed that NaHS with a concentrati ...
- DOI:
- 10.3390/agriculture10010012
-
https://dx.doi.org/10.3390/agriculture10010012
- Author:
- Huang, Yong‐Jiang; Zhu, Hai; Momohara, Arata; Jia, Lin‐Bo; Zhou, Zhe‐Kun
- Source:
- Journal of systematics and evolution 2019 v.57 no.2 pp. 180-189
- ISSN:
- 1674-4918
- Subject:
- Fragaria, etc ; Pliocene epoch; Rubus; fossils; fruits; China; Show all 6 Subjects
- Abstract:
- ... The subfamily Rosoideae Focke (Rosaceae) has a good fossil record in the Northern Hemisphere, but these fossil records are confined mainly to a few genera, whereas the majority, in particular those with herbaceous members, are still under‐represented. In this study, we describe new fruit fossils of Rosoideae, including Fragaria achenes and Rubus endocarps, from the late Pliocene of northwestern Yu ...
- DOI:
- 10.1111/jse.12443
-
http://dx.doi.org/10.1111/jse.12443
- Author:
- Xing, Sinian; Chen, Kunling; Zhu, Haocheng; Zhang, Rui; Zhang, Huawei; Li, Bingbing; Gao, Caixia
- Source:
- Genome biology 2020 v.21 no.1 pp. 230
- ISSN:
- 1474-760X
- Subject:
- Fragaria vesca, etc ; alleles; asexual reproduction; gene editing; genetic lines; homozygosity; mutants; open reading frames; phenotype; quantitative traits; strawberries; sugar content; Show all 12 Subjects
- Abstract:
- ... Fine-tuning quantitative traits for continuous subtle phenotypes is highly advantageous. We engineer the highly conserved upstream open reading frame (uORF) of FvebZIPs1.1 in strawberry (Fragaria vesca), using base editor A3A-PBE. Seven novel alleles are generated. Sugar content of the homozygous T1 mutant lines is 33.9–83.6% higher than that of the wild-type. We also recover a series of transgene ...
- DOI:
- 10.1186/s13059-020-02146-5
-
https://dx.doi.org/10.1186/s13059-020-02146-5
- Author:
- Lewers, Kimberly S.; Lewers, Kim S.; Fleisher, David H.; Daughtry, Craig S. T.; Vinyard, Bryan T.
- Source:
- International journal of fruit science 2020 v.20 no.S2 pp. S705
- ISSN:
- 1553-8621
- Subject:
- Fragaria ananassa, etc ; crop production; cultivars; fruit growing; fruit quality; harvest date; markets; polyethylene film; strawberries; Northeastern United States; Show all 10 Subjects
- Abstract:
- ... Growing repeat-fruiting strawberries (Fragaria ×ananassa Duchesne ex Rozier) under low tunnels can extend a strawberry harvest season from a few weeks to several months. Yields from multiple dayneutral cultivars have been compared under a single film, and yields from single cultivars have been compared under multiple films, but a study of possible cultivar and film interaction effects in low tunne ...
- Handle:
- 10113/7019814
- DOI:
- 10.1080/15538362.2020.1768616
-
https://dx.doi.org/10.1080/15538362.2020.1768616
- Author:
- Renkema, Justin; Dubon, Franklin; Peres, Natalia; Evans, Braden
- Source:
- International journal of fruit science 2020 v.20 no.sup1 pp. 978-991
- ISSN:
- 1553-8621
- Subject:
- Fragaria ananassa, etc ; Tetranychus urticae; adults; cultivars; eggs; females; fruit growing; leaves; mite infestations; mites; mortality; pests; steam; strawberries; Florida; Show all 15 Subjects
- Abstract:
- ... The twospotted spider mite (Tetranychus urticae) is a serious pest of strawberries. The objectives of this study were to determine incidence and severity of twospotted spider mite infestations on transplants and the potential for steam to eliminate them. Mites occurred on transplants of Florida cultivars from each of eight North American nurseries from which samples were obtained, but levels were ...
- DOI:
- 10.1080/15538362.2020.1755769
-
https://dx.doi.org/10.1080/15538362.2020.1755769
- Author:
- Hasan, Md. Mehedi; Manavalan, Balachandran; Shoombuatong, Watshara; Khatun, Mst. Shamima; Kurata, Hiroyuki
- Source:
- Plant molecular biology 2020 v.103 no.1-2 pp. 225-234
- ISSN:
- 0167-4412
- Subject:
- Fragaria vesca, etc ; DNA; Rosa chinensis; bioinformatics; data collection; databases; epigenetics; gene expression; genome; models; nucleotide sequences; prediction; probability; regression analysis; Show all 14 Subjects
- Abstract:
- ... DNA N⁶-methyladenine (6 mA) is one of the most vital epigenetic modifications and involved in controlling the various gene expression levels. With the avalanche of DNA sequences generated in numerous databases, the accurate identification of 6 mA plays an essential role for understanding molecular mechanisms. Because the experimental approaches are time-consuming and costly, it is desirable to dev ...
- DOI:
- 10.1007/s11103-020-00988-y
-
http://dx.doi.org/10.1007/s11103-020-00988-y
- Author:
- Lu, Hongyan; Luo, Zisheng; Wang, Lei; Liu, Wusheng; Li, Dong; Belwal, Tarun; Xu, Yanqun; Li, Li
- Source:
- Plant science 2020 v.293 pp. 110422
- ISSN:
- 0168-9452
- Subject:
- Fragaria ananassa, etc ; biosynthesis; fruiting; gene expression regulation; gene overexpression; genes; metabolomics; proteomics; ripening; strawberries; volatile organic compounds; Show all 11 Subjects
- Abstract:
- ... The large-scale untargeted proteomic and metabolomic studies were conducted in strawberry (Fragaria × ananassa) cv. Akihime fruit at five developmental stages. We found that some C6 volatiles highly contributed to the enrichment of volatiles at the red stage of strawberry fruit. We found that 12 genes involved in LOX pathway for volatile biosynthesis showed multiple patterns in protein abundance d ...
- DOI:
- 10.1016/j.plantsci.2020.110422
-
https://dx.doi.org/10.1016/j.plantsci.2020.110422
- Author:
- Hata, Fernando Teruhiko; Ventura, Maurício Ursi; Ferreira, Nilson Zacarias Bernabé; Béga, Vinádio Lucas; Camacho, Iara Muniz; de Paula, Maria Tereza; Machado, Renato Ribeiro; de Lima, Danilo Pezzoto
- Source:
- Phytoparasitica 2020 v.48 no.2 pp. 183-190
- ISSN:
- 0334-2123
- Subject:
- Fragaria ananassa, etc ; Rhyparochromidae; adults; cultivars; economic threshold; greenhouses; insects; leaves; monitoring; nymphs; organic foods; pests; strawberries; trichomes; walking; Brazil; Show all 16 Subjects
- Abstract:
- ... Neopamera bilobata Say (Hemiptera: Rhyparochromidae) is an insect species which has been reported in Brazil and was recently updated as important pest of strawberry. Studies with N. bilobata habit and this species density on different strawberry cultivars are still incipient. Observations of N. bilobata adults and nymphs were realized on pseudofruits, leaves and over the substrate, near to the pla ...
- DOI:
- 10.1007/s12600-020-00791-x
-
http://dx.doi.org/10.1007/s12600-020-00791-x
- Author:
- Hwang, Eun Ju; Jeong, Su Yeon; Kim, Min Jee; Jeong, Jun Seong; Lee, Keon Hee; Jeong, Na Ra; Park, Jeong Sun; Choi, Deuk-Soo; Yim, Kyu-Ock; Kim, Iksoo
- Source:
- Journal of Asia-Pacific entomology 2020 v.23 no.1 pp. 204-213
- ISSN:
- 1226-8615
- Subject:
- Fragaria ananassa, etc ; Drosophila suzukii; attractants; cold; fruits; greenhouse production; greenhouses; insect traps; population size; strawberries; surveys; winter; woodlands; South Korea; Show all 14 Subjects
- Abstract:
- ... Korean greenhouse strawberries are mostly cultivated from October to May, which includes the cold winter season. During this time, the population size of the spotted-wing drosophila (SWD), Drosophila suzukii Matsumura (Diptera: Drosophilidae), is expected to decrease in the wild, and is also expected to decrease inside the greenhouses, as long as SWD are not already present inside. Field surveys o ...
- DOI:
- 10.1016/j.aspen.2020.01.004
-
https://dx.doi.org/10.1016/j.aspen.2020.01.004