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- Author:
- Kerrie Forrest, et al. ; Deepak Baranwal; Naeela Qureshi; Harbans Bariana; Urmil Bansal; Show all 5 Authors
- Source:
- Plant breeding 2022 v.141 no.3 pp. 332-337
- ISSN:
- 0179-9541
- Subject:
- Puccinia striiformis f. tritici; Triticum aestivum; chromosome mapping; chromosomes; cultivars; fungi; inbred lines; pathogens; pathotypes; resistance genes; seedlings; single nucleotide polymorphism; stripe rust of wheat; virulence; wheat
- Abstract:
- ... Puccinia striiformis f. sp. tritici (Pst), the causal agent of stripe rust of wheat, is a highly evolving fungal pathogen and several widely deployed stripe rust resistance genes have been overcome worldwide often through single step increase in virulence. Development of stripe rust resistant cultivars depends on the availability of widely effective sources of resistance. An Indian wheat cultivar ...
- DOI:
- 10.1111/pbr.13021
- https://doi.org/10.1111/pbr.13021
- Author:
- Kerrie Forrest, et al. ; Harbans Bariana; Lakshmi Kant; Naeela Qureshi; Hanif Miah; Urmil Bansal; Show all 6 Authors
- Source:
- Agronomy 2022 v.12 no.2 pp. -
- ISSN:
- 2073-4395
- Subject:
- Puccinia striiformis f. tritici; agronomy; alleles; cultivars; inbred lines; marker-assisted selection; pathotypes; polymerase chain reaction; single nucleotide polymorphism arrays; stripe rust; wheat
- Abstract:
- ... Wheat cultivar VL Gehun 892 has shown a high level of resistance against Australian Puccinia striiformis f. sp. tritici (Pst) pathotypes. In this study, it was crossed with Westonia, a susceptible wheat cultivar, and digenic segregation was observed in the derived population against Pst pathotype 134 E16A+Yr17+Yr27+. Single-gene recombinant inbred line (RIL) populations were developed from F₃ fami ...
- DOI:
- 10.3390/agronomy12020318
- https://doi.org/10.3390/agronomy12020318
- Author:
- Kerrie Forrest, et al. ; Darshan Lal Sharma; Roopali Bhoite; Karyn Reeves; Rosemary Smith; Mirza A. N. N. U. Dowla; Show all 6 Authors
- Source:
- Theoretical and applied genetics 2022 v.135 no.3 pp. 1113-1128
- ISSN:
- 0040-5752
- Subject:
- Triticum aestivum; brassinosteroids; chitin; chromosomes; flowering; gene frequency; germination; germplasm; haplotypes; homozygosity; pH; phenotype; photosynthesis; plant establishment; quantitative traits; seed development; soil structure; stem elongation; subsoil; toxicity; wheat; yield components
- Abstract:
- ... KEY MESSAGE: The pleiotropic SNPs/haplotypes, overlapping genes (metal ion binding, photosynthesis), and homozygous/biallelic SNPs and transcription factors (HTH myb-type and BHLH) hold great potential for improving wheat yield potential on sodic-dispersive soils. Sodic-dispersive soils have multiple subsoil constraints including poor soil structure, alkaline pH and subsoil toxic elemental ion con ...
- DOI:
- 10.1007/s00122-021-04021-8
- https://doi.org/10.1007/s00122-021-04021-8
- Author:
- Kerrie Forrest, et al. ; M. Fernanda Dreccer; Bethany Macdonald; Claire A. Farnsworth; M. Valeria Paccapelo; Mary Anne Awasi; Anthony G. Condon; Ian Lee Long; C. Lynne McIntyre; Show all 9 Authors
- Source:
- Theoretical and applied genetics 2022 v.135 no.5 pp. 1685-1703
- ISSN:
- 0040-5752
- Subject:
- cultivars; genetic correlation; genotyping; germplasm; heritability; phenotype; wheat
- Abstract:
- ... KEY MESSAGE: Low-lodging high-yielding wheat germplasm and SNP-tagged novel alleles for lodging were identified in a process that involved selecting donors through functional phenotyping for underlying traits with a designed phenotypic screen, and a crossing strategy involving multiple-donor × elite populations. Lodging is a barrier to achieving high yield in wheat. As part of a study investigatin ...
- DOI:
- 10.1007/s00122-022-04063-6
- https://doi.org/10.1007/s00122-022-04063-6
5. An adult plant stripe rust resistance gene maps on chromosome 7A of Australian wheat cultivar Axe
- Author:
- Kerrie Forrest, et al. ; Mehwish Kanwal; Naeela Qureshi; Mesfin Gessese; Prashanth Babu; Harbans Bariana; Urmil Bansal; Show all 7 Authors
- Source:
- Theoretical and applied genetics 2021 v.134 no.7 pp. 2213-2220
- ISSN:
- 0040-5752
- Subject:
- chromosomes; cultivars; genetic analysis; genotyping; greenhouses; inbred lines; leaves; mature plants; monogenic inheritance; resistance genes; seedlings; stripe rust; wheat
- Abstract:
- ... KEY MESSAGE: An adult plant stripe rust resistance gene Yr75 was located on the long arm of chromosome 7A. Fine mapping of the region identified markers closely linked with Yr75. Australian wheat cultivar Axe produced resistant to moderately resistant stripe rust responses under field conditions and was exhibiting seedling responses varying from 33C to 3+ under greenhouse conditions. Experiments c ...
- DOI:
- 10.1007/s00122-021-03818-x
- https://doi.org/10.1007/s00122-021-03818-x
- Author:
- Kerrie Forrest, et al. ; Rohit Mago; Chunhong Chen; Xiaodi Xia; Alex Whan; Bhoja R. Basnet; Geetha Perera; Sutha Chandramohan; Mandeep Randhawa; Matthew Hayden; Urmil Bansal; Julio Huerta-Espino; Ravi P. Singh; Harbans Bariana; Evans Lagudah; Show all 15 Authors
- Source:
- Theoretical and applied genetics 2022 v.135 no.5 pp. 1541-1550
- ISSN:
- 0040-5752
- Subject:
- cultivars; durum wheat; genomics; genotyping; inbred lines; loci; mature plants; resistance genes; stem rust
- Abstract:
- ... KEY MESSAGE: Adult plant stem rust resistance locus, QSrGH.cs-2AL, was identified in durum wheat Glossy Huguenot and mendelised as Sr63. Markers closely linked with Sr63 were developed. An F₃ population from a Glossy Huguenot (GH)/Bansi cross used in a previous Australian study was advanced to F₆ for molecular mapping of adult plant stem rust resistance. Maturity differences among F₆ lines confoun ...
- DOI:
- 10.1007/s00122-022-04052-9
- https://doi.org/10.1007/s00122-022-04052-9
- Author:
- Kerrie Forrest, et al. ; Maryam Tariq; Javed Iqbal Mirza; Shaukat Hussain; Naeela Qureshi; Harbans Bariana; Urmil Bansal; Show all 7 Authors
- Source:
- Euphytica 2021 v.217 no.6 pp. 121
- ISSN:
- 0014-2336
- Subject:
- Puccinia striiformis f. tritici; cultivars; genotyping by sequencing; greenhouses; inbred lines; landraces; loci; mature plants; pathotypes; resistance genes; stripe rust; wheat; Pakistan
- Abstract:
- ... Stripe (yellow) rust caused by Puccinia striiformis f. sp. tritici (Pst) is a major disease in many wheat growing regions. The objective of this study was to characterise stripe rust resistance in a common wheat landrace PI388231, originated from Sindh province of Pakistan, which confers high to moderate levels of resistance against Pst pathotypes prevalent in Pakistan. A recombinant inbred line ( ...
- DOI:
- 10.1007/s10681-021-02856-2
- https://doi.org/10.1007/s10681-021-02856-2
- Author:
- Kerrie Forrest, et al. ; Marcos Malosetti; Laura B. Zwep; Fred A. van Eeuwijk; Mark Dieters; Show all 5 Authors
- Source:
- Theoretical and applied genetics 2021 v.134 no.3 pp. 897-908
- ISSN:
- 0040-5752
- Subject:
- Fusarium; backcrossing; crown rot; genomics; germplasm; pedigree; phenotypic selection; progeny; wheat
- Abstract:
- ... Much has been published on QTL detection for complex traits using bi-parental and multi-parental crosses (linkage analysis) or diversity panels (GWAS studies). While successful for detection, transferability of results to real applications has proven more difficult. Here, we combined a QTL detection approach using a pre-breeding populations which utilized intensive phenotypic selection for the tar ...
- DOI:
- 10.1007/s00122-020-03740-8
- https://doi.org/10.1007/s00122-020-03740-8
- Author:
- Kerrie Forrest, et al. ; Zibei Lin; Hannah Robinson; Jayfred Godoy; Allan Rattey; David Moody; Daniel Mullan; Gabriel Keeble‐Gagnere; Josquin Tibbits; Matthew J. Hayden; Hans Daetwyler; Dunia Pino Del Carpio; Show all 12 Authors
- Source:
- Crop science 2021 v.61 no.4 pp. 2323-2335
- ISSN:
- 0011-183X
- Subject:
- Hordeum vulgare; barley; genomics; genotype-environment interaction; grain yield; models; prediction; variance; weather; Australia
- Abstract:
- ... Genotype × environment interaction (GEI) is one of the key factors affecting breeding value estimation accuracy for agronomic traits in plant breeding. Measures of GEI include fitting prediction models with various kernels to capture the variance resulting from GEI, and characterizing trials into megaenvironment (ME) clusters within which breeding values can be estimated to remove the main GEI eff ...
- DOI:
- 10.1002/csc2.20460
- https://doi.org/10.1002/csc2.20460
- Author:
- Kerrie Forrest, et al. ; Sang He; Rebecca Thistlethwaite; Fan Shi; Matthew J. Hayden; Richard Trethowan; Hans D. Daetwyler; Show all 7 Authors
- Source:
- Theoretical and applied genetics 2019 v.132 no.11 pp. 3143-3154
- ISSN:
- 0040-5752
- Subject:
- epistasis; genomics; genotype-environment interaction; grain protein; grain yield; haplotypes; models; plant height; prediction; protein content; wheat
- Abstract:
- ... KEY MESSAGE: A multi-environment genomic prediction model incorporating environmental covariates increased the prediction accuracy of wheat grain protein content. The advantage of the haplotype-based model was dependent upon the trait of interest. The inclusion of environment covariates (EC) in genomic prediction models has the potential to precisely model environmental effects and genotype-by-env ...
- DOI:
- 10.1007/s00122-019-03413-1
- https://doi.org/10.1007/s00122-019-03413-1
- Author:
- Kerrie Forrest, et al. ; Naveenkumar Athiyannan; Yunming Long; Houyang Kang; Sutha Chandramohan; Dhara Bhatt; Qijun Zhang; Daryl L. Klindworth; Matthew N. Rouse; Timothy L. Friesen; Robert McIntosh; Peng Zhang; Mathew Hayden; Mehran Patpour; Mogens S. Hovmøller; Lee T. Hickey; Michael Ayliffe; Xiwen Cai; Evans S. Lagudah; Sambasivam Periyannan; Steven S. Xu; Show all 21 Authors
- Source:
- Theoretical and applied genetics 2022 v.135 no.8 pp. 2627-2639
- ISSN:
- 0040-5752
- Subject:
- Aegilops tauschii; Puccinia graminis; alleles; amino acid sequences; amino acids; diploidy; genetic analysis; genetic markers; haplotypes; nucleotide sequences; nucleotides; pathogens; sequence analysis; stem rust; virulence; wheat
- Abstract:
- ... KEY MESSAGE: Stem rust resistance genes, SrRL5271 and Sr672.1 as well as SrCPI110651, from Aegilops tauschii, the diploid D genome progenitor of wheat, are sequence variants of Sr46 differing by 1–2 nucleotides leading to non-synonymous amino acid substitutions. The Aegilops tauschii (wheat D-genome progenitor) accessions RL 5271 and CPI110672 were identified as resistant to multiple races (includ ...
- DOI:
- 10.1007/s00122-022-04132-w
- https://doi.org/10.1007/s00122-022-04132-w
- Author:
- Kerrie Forrest, et al. ; Michael G. Francki; Esther Walker; Dora A. Li; Show all 4 Authors
- Source:
- Genome 2018 v.61 no.2 pp. 145-149
- ISSN:
- 1480-3321
- Subject:
- Parastagonospora nodorum; crossing; genes; genomics; genotyping; hexaploidy; leaves; loci; mature plants; microsatellite repeats; progeny; quantitative trait loci; single nucleotide polymorphism; wheat
- Abstract:
- ... The genetic control of adult plant resistance to Stagonospora nodorum blotch (SNB) is complex, consisting of genes with minor effects interacting in an additive manner. Earlier studies detected quantitative trait loci (QTL) for flag leaf resistance in successive years on chromosomes 1B, 2A, 2D, and 5B using SSR- and DArT-based genetic maps of progeny from the crosses EGA Blanco/Millewa, 6HRWSN125/ ...
- DOI:
- 10.1139/gen-2017-0203
- https://doi.org/10.1139/gen-2017-0203
- Author:
- Kerrie Forrest, et al. ; Miao Liu; Tina Rathjen; Kumara Weligama; Matthew Hayden; Emmanuel Delhaize; Show all 6 Authors
- Source:
- Annals of botany 2017 v.119 no.8 pp. 1333-1341
- ISSN:
- 1095-8290
- Subject:
- aneuploidy; crops; cultivars; genes; loci; nutrients; phosphorus; polyploidy; rapid methods; root hairs; seedlings; single nucleotide polymorphism; soil; wheat
- Abstract:
- ... Background and Aims Long root hairs enable the efficient uptake of poorly mobile nutrients such as phosphorus. Mapping the chromosomal locations of genes that control root hair length can help exploit the natural variation within crops to develop improved cultivars. Genetic stocks of the wheat cultivar ‘Chinese Spring’ were used to map genes that control root hair length. Methods Aneuploid stocks ...
- DOI:
- 10.1093/aob/mcx030
- PubMed:
- 28402495
- PubMed Central:
- PMC5604551
- https://doi.org/10.1093/aob/mcx030
- Author:
- Kerrie Forrest, et al. ; Reem Joukhadar; Grant Hollaway; Fan Shi; Surya Kant; Debbie Wong; Joanna Petkowski; Raj Pasam; Josquin Tibbits; Harbans Bariana; Urmil Bansal; German Spangenberg; Hans Daetwyler; Tony Gendall; Matthew Hayden; Show all 15 Authors
- Source:
- Theoretical and applied genetics 2020 v.133 no.9 pp. 2695-2712
- ISSN:
- 0040-5752
- Subject:
- Thinopyrum elongatum; chromosomes; cultivars; germplasm; landraces; linkage disequilibrium; marker-assisted selection; quantitative traits; resistance genes; wheat
- Abstract:
- ... We utilized 2300 wheat accessions including worldwide landraces, cultivars and primary synthetic-derived germplasm with three Australian cultivars: Annuello, Yitpi and Correll, to investigate field-based resistance to leaf (Lr) rust, stem (Sr) rust and stripe (Yr) rust diseases across a range of Australian wheat agri-production zones. Generally, the resistance in the modern Australian cultivars, s ...
- DOI:
- 10.1007/s00122-020-03626-9
- https://doi.org/10.1007/s00122-020-03626-9
15. Adult plant stripe rust resistance gene Yr71 maps close to Lr24 in chromosome 3D of common wheat
- Author:
- Kerrie Forrest, et al. ; Harbans Bariana; Naeela Qureshi; Hanif Miah; Matthew Hayden; Urmil Bansal; Show all 6 Authors
- Source:
- Molecular breeding 2016 v.36 no.7 pp. 98
- ISSN:
- 1380-3743
- Subject:
- chromosome mapping; cultivars; genes; genotyping; inbred lines; loci; marker-assisted selection; mature plants; microsatellite repeats; seedlings; single nucleotide polymorphism; stripe rust; wheat
- Abstract:
- ... Australian cultivar Sunco carries three adult plant stripe rust resistance genes. One of these genes corresponded to Yr18 in chromosome 7DS; the second, YrCK, was mapped on chromosome 2D. Here, we describe the characterization of the third adult plant resistance (APR) gene from Sunco. Sunco/2*Avocet S-derived lines SA65 (resistant) and SA67 (susceptible) were crossed and a recombinant inbred line ...
- DOI:
- 10.1007/s11032-016-0528-1
- https://doi.org/10.1007/s11032-016-0528-1
- Author:
- Kerrie Forrest, et al. ; Camilla Beate Hill; Tefera Tolera Angessa; Lee‐Anne McFawn; Debbie Wong; Josquin Tibbits; Xiao‐Qi Zhang; David Moody; Paul Telfer; Sharon Westcott; Dean Diepeveen; Yanhao Xu; Cong Tan; Matthew Hayden; Chengdao Li; Show all 15 Authors
- Source:
- Plant biotechnology journal 2019 v.17 no.5 pp. 932-944
- ISSN:
- 1467-7644
- Subject:
- Arabidopsis thaliana; Hordeum vulgare; allelic variation; barley; biotechnology; cultivars; foods; genetic improvement; genomics; grain yield; livestock feeds; phenology; phenotypic variation; plant height; rice
- Abstract:
- ... Barley (Hordeum vulgare L.) is a major cereal grain widely used for livestock feed, brewing malts and human food. Grain yield is the most important breeding target for genetic improvement and largely depends on optimal timing of flowering. Little is known about the allelic diversity of genes that underlie flowering time in domesticated barley, the genetic changes that have occurred during breeding ...
- DOI:
- 10.1111/pbi.13029
- PubMed:
- 30407713
- PubMed Central:
- PMC6587706
- https://doi.org/10.1111/pbi.13029
- Author:
- Kerrie Forrest, et al. ; Naeela Qureshi; Harbans Bariana; Matthew Hayden; Beat Keller; Thomas Wicker; Justin Faris; Elena Salina; Urmil Bansal; Show all 9 Authors
- Source:
- Theoretical and applied genetics 2017 v.130 no.3 pp. 495-504
- ISSN:
- 0040-5752
- Subject:
- rust diseases; microsatellite repeats; marker-assisted selection; genetic resistance; chromosomes; expressed sequence tags; surveys; wheat; chromosome mapping; Triticum aestivum; Brachypodium distachyon; disease resistance; genotype; genotyping; inbred lines; single nucleotide polymorphism
- Abstract:
- ... KEY MESSAGE: Fine mapping of Yr47 and Lr52 in chromosome arm 5BS of wheat identified close linkage of the marker sun180 to both genes and its robustness for marker-assisted selection was demonstrated. The widely effective and genetically linked rust resistance genes Yr47 and Lr52 have previously been mapped in the short arm of chromosome 5B in two F₃ populations (Aus28183/Aus27229 and Aus28187/Aus ...
- Handle:
- 10113/5759211
- DOI:
- 10.1007/s00122-016-2829-5
- https://doi.org/10.1007/s00122-016-2829-5
- Author:
- Kerrie Forrest, et al. ; Vincent Pujol; Peter Bulli; Michael Pumphrey; Colin Wellings; Sybil Herrera-Foessel; Julio Huerta-Espino; Ravi Singh; Evans Lagudah; Matthew Hayden; Wolfgang Spielmeyer; Show all 11 Authors
- Source:
- Molecular breeding 2014 v.34 no.4 pp. 2109-2118
- ISSN:
- 1380-3743
- Subject:
- alleles; fungi; genetic markers; genotyping; germplasm; landraces; marker-assisted selection; mature plants; microsatellite repeats; pathogens; screening; single nucleotide polymorphism; stripe rust; wheat
- Abstract:
- ... The recently characterised and mapped adult plant resistance gene Lr67 contributes to the breeding of durable resistance against multiple fungal pathogens of wheat. Lack of tightly linked markers has so far prevented widespread use of Lr67 in breeding programmes. Exhaustive screening of available SSR markers and 9,000 gene-associated SNPs using bulk segregant analysis yielded several linked marker ...
- DOI:
- 10.1007/s11032-014-0166-4
- https://doi.org/10.1007/s11032-014-0166-4
- Author:
- Kerrie Forrest, et al. ; Gabriel Keeble-Gagnère; Philippe Rigault; Josquin Tibbits; Raj Pasam; Matthew Hayden; Zeev Frenkel; Abraham Korol; B. Emma Huang; Colin Cavanagh; Jen Taylor; Michael Abrouk; Andrew Sharpe; David Konkin; Pierre Sourdille; Benoît Darrier; Frédéric Choulet; Aurélien Bernard; Simone Rochfort; Adam Dimech; Nathan Watson-Haigh; Ute Baumann; Paul Eckermann; Delphine Fleury; Angela Juhasz; Sébastien Boisvert; Marc-Alexandre Nolin; Jaroslav Doležel; Hana Šimková; Helena Toegelová; Jan Šafář; Ming-Cheng Luo; Francisco Câmara; Matthias Pfeifer; Don Isdale; Johan Nyström-Persson; IWGSC; Dal-Hoe Koo; Matthew Tinning; Dangqun Cui; Zhengang Ru; Rudi Appels; Show all 42 Authors
- Source:
- Genome biology 2018 v.19 no.1 pp. 112
- ISSN:
- 1474-760X
- Subject:
- bacterial artificial chromosomes; centromeres; finishing; fructans; genes; grain quality; hexosyltransferases; humans; lipids; models; phenotype; sequence analysis; wheat
- Abstract:
- ... BACKGROUND: Numerous scaffold-level sequences for wheat are now being released and, in this context, we report on a strategy for improving the overall assembly to a level comparable to that of the human genome. RESULTS: Using chromosome 7A of wheat as a model, sequence-finished megabase-scale sections of this chromosome were established by combining a new independent assembly using a bacterial art ...
- DOI:
- 10.1186/s13059-018-1475-4
- PubMed:
- 30115128
- PubMed Central:
- PMC6097218
- https://doi.org/10.1186/s13059-018-1475-4
- Author:
- Kerrie Forrest, et al. ; Colin R. Cavanagh; Shiaoman Chao; Shichen Wang; Bevan Emma Huang; Stuart Stephen; Seifollah Kiani; Cyrille Saintenac; Gina L. Brown-Guedira; Alina Akhunova; Deven See; Guihua Bai; Michael Pumphrey; Luxmi Tomar; Debbie Wong; Stephan Kong; Matthew Reynolds; Marta Lopez da Silva; Harold Bockelman; Luther Talbert; James A. Anderson; Susanne Dreisigacker; Stephen Baenziger; Arron Carter; Viktor Korzun; Peter Laurent Morrell; Jorge Dubcovsky; Matthew K. Morell; Mark E. Sorrells; Matthew J. Hayden; Eduard Akhunov; Show all 31 Authors
- Source:
- Proceedings of the National Academy of Sciences of the United States of America 2013 v.110 no.20 pp. 8057-8062
- ISSN:
- 0027-8424
- Subject:
- Triticum aestivum; alleles; artificial selection; crops; disease resistance; environmental factors; flowering; fungal diseases of plants; fungi; genetic improvement; genetic variation; haplotypes; hexaploidy; high-yielding varieties; introgression; landraces; pathogens; phenology; plant breeding; sampling; single nucleotide polymorphism; temporal variation; wheat; wild relatives
- Abstract:
- ... Domesticated crops experience strong human-mediated selection aimed at developing high-yielding varieties adapted to local conditions. To detect regions of the wheat genome subject to selection during improvement, we developed a high-throughput array to interrogate 9,000 gene-associated single-nucleotide polymorphisms (SNP) in a worldwide sample of 2,994 accessions of hexaploid wheat including lan ...
- Handle:
- 10113/57900
- DOI:
- 10.1073/pnas.1217133110
- PubMed:
- 23630259
- PubMed Central:
- PMC3657823
- https://doi.org/10.1073/pnas.1217133110