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1. Development of an in vitro model for animal species susceptibility to SARS-CoV-2 replication based on expression of ACE2 and TMPRSS2 in avian cells

Author:
Mary Pantin-Jackwood,   et al.   ; Darrell R. Kapczynski; Ryan Sweeney; Erica Spackman; David L. Suarez;     Show all 5 Authors
Source:
Virology 2022 v.569 pp. 1-12
ISSN:
0042-6822
Subject:
Capra hircus; Hipposideros; Mesocricetus auratus; Myotis lucifugus; Severe acute respiratory syndrome coronavirus 2; birds; cats; cell culture; cell lines; fibroblasts; genetically modified organisms; goats; horses; humans; models; pandemic; peptidyl-dipeptidase A; serine proteinases; swine; virology; viruses
Abstract:
... The SARS-CoV-2 (SARS-CoV-2) virus has caused a worldwide pandemic because of the virus's ability to transmit efficiently human-to-human. A key determinant of infection is the attachment of the viral spike protein to the host receptor angiotensin-converting enzyme 2 (ACE2). Because of the presumed zoonotic origin of SARS-CoV-2, there is no practical way to assess the susceptibility of every species ...
DOI:
10.1016/j.virol.2022.01.014

2. In situ cytokine gene expression in early stage of virulent Newcastle disease in chickens

Author:
Mary Pantin-Jackwood,   et al.   ; Corrie Brown; Jian Zhang; Kiril Dimitrov; Helena Lage Ferreira; David Suarez;     Show all 6 Authors
Source:
Veterinary pathology 2022 v.59 no.1 pp. 75-81
ISSN:
1544-2217
Subject:
Avian orthoavulavirus 1; B-lymphocytes; Newcastle disease; T-lymphocytes; animal pathology; antigens; cloaca; disease severity; gene expression; hybridization; immunohistochemistry; interleukin-6; spleen; virulence; California
Abstract:
... Selected lymphoid and reproductive tissues were examined from groups of 3-week-old chickens and 62-week-old hens that were inoculated choanally and conjunctivally with 10⁶ EID₅₀ of a virulent Newcastle disease virus (NDV) isolate from the California 2018–2020 outbreak, and euthanized at 1, 2, and 3 days postinfection. In the 3-week-old chickens, immunohistochemistry for NDV and for T and B cell ly ...
DOI:
10.1177/03009858211045945

3. Virus Adaptation Following Experimental Infection of Chickens with a Domestic Duck Low Pathogenic Avian Influenza Isolate from the 2017 USA H7N9 Outbreak Identifies Polymorphic Mutations in Multiple Gene Segments

Author:
Mary Pantin-Jackwood,   et al.   ; Klaudia Chrzastek; Karen Segovia; Mia Torchetti; Mary Lee Killian; Darrell R. Kapczynski;     Show all 6 Authors
Source:
Viruses 2021 v.13 no.6 pp. -
ISSN:
1999-4915
Subject:
Influenza A virus; avian influenza; cloaca; disease transmission; ducks; evolution; genes; hemagglutinins; inoculum; isoleucine; virus replication; viruses; Alabama
Abstract:
... In March 2017, highly pathogenic (HP) and low pathogenic (LP) avian influenza virus (AIV) subtype H7N9 were detected from poultry farms and backyard birds in several states in the southeast United States. Because interspecies transmission is a known mechanism for evolution of AIVs, we sought to characterize infection and transmission of a domestic duck-origin H7N9 LPAIV in chickens and genetically ...
DOI:
10.3390/v13061166

4. The pathogenesis of H7 highly pathogenic avian influenza viruses in Lesser Scaup (Aythya affinis)

Author:
Mary Pantin-Jackwood,   et al.   ; Christopher Stephens; Diann Prosser; Alicia Berlin; Erica Spacjman;     Show all 5 Authors
Source:
Avian diseases 2019 v.63 no.1 pp. 230-234
ISSN:
0005-2086
Subject:
Aythya affinis; Influenza A virus; bird diseases; body temperature; chickens; cloaca; ducks; eggs; hosts; mortality; pathogenesis; pathogenicity; viral shedding; virulent strains; viruses; waterfowl; wild birds; United States
Abstract:
... Waterfowl are the natural hosts of avian influenza virus (AIV), and through migration spread the virus worldwide. Most AIVs carried by wild waterfowl are low pathogenic strains; however, Goose/Guangdong/1996 lineage clade 2.3.4.4 H5 highly pathogenic (HP) AIV now appears to be endemic in wild birds in much of the Eastern Hemisphere. Most research efforts studying AIV pathogenicity in waterfowl thu ...
Handle:
10113/6471143
DOI:
https://doi.org/10.1637/11909-060118-ResNote.1

5. Age-Associated Changes in Recombinant H5 Highly Pathogenic and Low Pathogenic Avian Influenza Hemagglutinin Tissue Binding in Domestic Poultry Species

Author:
Mary Pantin-Jackwood,   et al.   ; Carmen Jerry; David E. Stallknecht; Christina Leyson; Roy Berghaus; Brian Jordan; Monique S. França;     Show all 7 Authors
Source:
Animals 2021 v.11 no.8 pp. -
ISSN:
2076-2615
Subject:
Anas acuta; Anas platyrhynchos; Influenza A virus; Muscovy; Pekin; avian influenza; death; genes; hemagglutinins; histochemistry; intestines; lungs; statistical analysis; waterfowl; wild birds
Abstract:
... The 2014 outbreak of clade 2.3.4.4A highly pathogenic avian influenza (HPAI) led to the culling of millions of commercial chickens and turkeys and death of various wild bird species. In this outbreak, older chickens and turkeys were commonly infected, and succumbed to clinical disease compared to younger aged birds such chicken broilers. Some experimental studies using waterfowl species have shown ...
DOI:
10.3390/ani11082223

6. Clade 2.3.4.4 H5 North American Highly Pathogenic Avian Influenza Viruses Infect, but Do Not Cause Clinical Signs in, American Black Ducks (Anas rubripes)

Author:
Mary Pantin-Jackwood,   et al.   ; Erica Spackman; Diann J. Prosser; Christopher B. Stephens; Alicia M. Berlin;     Show all 5 Authors
Source:
Avian diseases 2019 v.63 no.2 pp. 366-370
ISSN:
0005-2086
Subject:
Anas acuta; Anas platyrhynchos; Anas rubripes; Falco rusticolus; Influenza A virus; chickens; ducks; eggs; geese; signs and symptoms (animals and humans); turkeys; viruses; wild birds; Asia; North America
Abstract:
... Highly pathogenic avian influenza virus (HPAIV) from the goose/Guangdong/1996 clade 2.3.4.4 H5 lineage spread from Asia into North America in 2014, most likely by wild bird migrations. Although several variants of the virus were detected, H5N8 and H5N2 were the most widespread in North American wild birds and domestic poultry. In early 2015, the H5N2 virus spread through commercial poultry in the ...
Handle:
10113/6460373
DOI:
10.1637/11950-081418-ResNote.1

7. Evidence for genetic variation of Eurasian avian influenza viruses of subtype H15: the first report of an H15N7 virus

Author:
Mary Pantin-Jackwood,   et al.   ; Denys Muzyka; Elke Starick; Sasan Fereidouni;     Show all 4 Authors
Source:
Archives of virology 2016 v.161 no.3 pp. 605-612
ISSN:
0304-8608
Subject:
Orthomyxoviridae; amino acid motifs; antigens; antiserum; chicken eggs; genetic variation; viruses; Australia; Siberia; Ukraine
Abstract:
... Since the first detection of H15 avian influenza viruses (AIVs) in Australia in 1979, only seven H15 strains have been reported. A new H15 AIV was detected in Ukraine in 2010, carrying the unique HA-NA subtype combination H15N7. This virus replicated efficiently in chicken eggs, and antisera against it reacted strongly with the homologous antigen, but with lower titers when using the reference Aus ...
Handle:
10113/5061806
DOI:
10.1007/s00705-015-2629-2

8. Pathobiology of Clade 2.3.4.4 H5Nx High-Pathogenicity Avian Influenza Virus Infections in Minor Gallinaceous Poultry Supports Early Backyard Flock Introductions in the Western United States in 2014-2015

Author:
Mary Pantin-Jackwood,   et al.   ; Kateri Bertran; Dong-Hun Lee; Erica Spackman; Charles Balzli; David Suarez; David Swayne;     Show all 7 Authors
Source:
Journal of virology 2017 v.91 no.21 pp. 1-16
ISSN:
1098-5514
Subject:
Alectoris chukar; Colinus virginianus; Coturnix japonica; Influenza A virus; avian influenza; chickens; flocks; genes; genomics; guineafowl; host range; industry; livestock diseases; monitoring; mutation; partridges; pathogenesis; pheasants; proteins; refining; sequence analysis; turkeys; viral shedding; virus replication; waterfowl; wild birds; Western United States
Abstract:
... In 2014 and 2015, the United States experienced an unprecedented outbreak of Eurasian clade 2.3.4.4 H5 highly pathogenic avian influenza (HPAI) virus. Initial cases affected mainly wild birds and mixed backyard poultry species, while later outbreaks affected mostly commercial chickens and turkeys. The pathogenesis, transmission, and intrahost evolutionary dynamics of initial Eurasian H5N8 and reas ...
Handle:
10113/6472254
DOI:
10.1128/JVI.00960-17
PubMed:
28794040
PubMed Central:
PMC5640860

9. Transmission Dynamics of Highly Pathogenic Avian Influenza Virus A(H5Nx) Clade 2.3.4.4, North America, 2014–2015

Author:
Mary Pantin-Jackwood,   et al.   ; David Swayne; Dong-Hun Lee; Mia Torchetti; Joseph Hicks; Mary Killian; Justin Bahl;     Show all 7 Authors
Source:
Emerging infectious diseases 2018 v.24 no.10 pp. 1840-1848
ISSN:
1080-6059
Subject:
Influenza A virus; biosecurity; chickens; disease transmission; farms; genomics; nucleotide sequences; outbreak investigation; poultry industry; turkeys; viruses; wild birds; Eurasia; United States
Abstract:
... Eurasia highly pathogenic avian influenza virus (HPAIV) H5 clade 2.3.4.4 emerged in North America at the end of 2014 and caused outbreaks affecting >50 million poultry in the United States before eradication in June 2015. We investigated the underlying ecologic and epidemiologic processes associated with this viral spread by performing a comparative genomic study using 268 full-length genome seque ...
Handle:
10113/6471417
DOI:
10.3201/eid2410.171891
PubMed:
30226167
PubMed Central:
PMC6154162

10. Effect of species, breed and route of virus inoculation on the pathogenicity of H5N1 highly pathogenic influenza (HPAI) viruses in domestic ducks

Author:
Mary Pantin-Jackwood,   et al.   ; David E. Swayne; Eric Shepherd;     Show all 3 Authors
Source:
Veterinary research 2013 v.44 no.62 pp. 1-11
ISSN:
1297-9716
Subject:
Anas platyrhynchos; Cairina moschata; Khaki Campbell; Pekin; avian influenza; control methods; ducks; exposure pathways; virulence; viruses
Abstract:
... H5N1 highly pathogenic avian influenza (HPAI) viruses continue to be a threat to poultry in many regions of the world. Domestic ducks have been recognized as one of the primary factors in the spread of H5N1 HPAI. In this study we examined the pathogenicity of H5N1 HPAI viruses in different species and breeds of domestic ducks and the effect of route of virus inoculation on the outcome of infection ...
Handle:
10113/60119
DOI:
10.1186/1297-9716-44-62
PubMed:
23876184
PubMed Central:
PMC3733953

11. Use of Sequence-Independent, Single-Primer-Amplification (SISPA) for rapid detection, identification, and characterization of avian RNA viruses

Author:
Mary Pantin-Jackwood,   et al.   ; Klaudia Chrzastek; Dong-hun Lee; Diane Smith; Poonam Sharma; David L. Suarez; Darrell R. Kapczynski;     Show all 7 Authors
Source:
Virology 2017 v.509 pp. 159-166
ISSN:
0042-6822
Subject:
genome assembly; genome; Influenza A virus; high-throughput nucleotide sequencing; rapid methods; metagenomics; Avian orthoavulavirus 1; viruses; Infectious bronchitis virus; microbial detection; nucleotide sequences; RNA; birds
Abstract:
... Current technologies with next generation sequencing have revolutionized metagenomics analysis of clinical samples. To achieve the non-selective amplification and recovery of low abundance genetic sequences, a simplified Sequence-Independent, Single-Primer Amplification (SISPA) technique in combination with MiSeq platform was applied to target negative- and positive-sense single-stranded RNA viral ...
Handle:
10113/5729157
DOI:
10.1016/j.virol.2017.06.019
PubMed:
28646651
PubMed Central:
PMC7111618

12. Isolation and genetic characterization of avian influenza viruses from wild birds in the Azov-Black Sea region of Ukraine (2006-2011)

Author:
Mary Pantin-Jackwood,   et al.   ; Denys Muzyka; Erica Spackman; Diane Smith; Olekdandr Rula; Nataliia Muzyka; Borys Stegniy;     Show all 7 Authors
Source:
Avian diseases 2016 v.60 no. pp. 365-377
ISSN:
0005-2086
Subject:
Influenza A virus; antigens; blood serum; disease outbreaks; ecology; egg yolk; genes; genetic variation; hemagglutinins; hydrogen; migratory behavior; monitoring; pathogenicity; phylogeny; sequence analysis; serology; sialidase; viruses; wild birds; Africa; Black Sea; Mongolia; Russia; South East Asia; Ukraine
Abstract:
... Wild bird surveillance for avian influenza virus (AIV) was conducted from 2001 to 2012 in the Azov - Black Sea region of the Ukraine, considered part of the transcontinental wild bird migration routes from northern Asia and Europe to the Mediterranean, Africa, and southwest Asia. A total of 6281 samples were collected from wild birds representing 27 families and eight orders for virus isolation. F ...
Handle:
10113/62740
DOI:
10.1637/11114-050115

13. Highly Pathogenic and Low Pathogenic Avian Influenza H5 Subtype Viruses in Wild Birds in Ukraine

Author:
Mary Pantin-Jackwood,   et al.   ; Denys Muzyka; Oleksandr Rula; Semen Tkachenko; Nataliia Muzyka; Susanne Köthe; Oleksandr Pishchanskyi; Borys Stegniy; Martin Beer;     Show all 9 Authors
Source:
Avian diseases 2018 v.63 no.sp1 pp. 219-229
ISSN:
0005-2086
Subject:
Anser albifrons; Cygnus olor; Influenza A virus; Phalacrocorax carbo; Podiceps cristatus; Tadorna ferruginea; avian influenza; chickens; ducks; ecology; feces; geese; hemagglutinins; monitoring; peafowl; phylogeny; sialidase; viruses; wild birds; zoos; Ukraine
Abstract:
... There have been three waves of highly pathogenic avian influenza (HPAI) outbreaks in commercial, backyard poultry, and wild birds in Ukraine. The first (2005–2006) and second (2008) waves were caused by H5N1 HPAI virus, with 45 outbreaks among commercial poultry (chickens) and backyard fowl (chickens, ducks, and geese) in four regions of Ukraine (AR Crimea, Kherson, Odesa, and Sumy Oblast). H5N1 H ...
Handle:
10113/6452316
DOI:
10.1637/11879-042718-ResNote.1

14. Success Factors for Avian Influenza Vaccine Use in Poultry and Potential Impact at the Wild Bird-Agricultural Interface

Author:
Mary Pantin-Jackwood,   et al.   ; David E. Swayne; Erica Spackman;     Show all 3 Authors
Source:
Ecohealth 2014 v.11 no.1 pp. 94-108
ISSN:
1612-9202
Subject:
Orthomyxoviridae; antigenic variation; avian influenza; disease control; ducks; epizootic diseases; immunity; pathogenicity; vaccination; vaccines; viruses; wild birds; China; Egypt; Indonesia; Vietnam
Abstract:
... Thirty-two epizootics of high pathogenicity avian influenza (HPAI) have been reported in poultry and other birds since 1959. The ongoing H5N1 HPAI epizootic that began in 1996 has also spilled over to infect wild birds. Traditional stamping-out programs in poultry have resulted in eradication of most HPAI epizootics. However, vaccination of poultry was added as a control tool in 1995 and has been ...
Handle:
10113/59852
DOI:
10.1007/s10393-013-0861-3
PubMed:
24026475

15. Impact of route of exposure and challenge dose on the pathogenesis of H7N9 low pathogenicity avian influenza virus in chickens

Author:
Mary Pantin-Jackwood,   et al.   ; Erica Spackman; David E. Swayne; David L. Suarez; Darrell R. Kapczynski;     Show all 5 Authors
Source:
Virology 2015 v.477 pp. 72-81
ISSN:
0042-6822
Subject:
Influenza A virus; White Leghorn; chickens; exposure pathways; genetics; human diseases; influenza; intravenous injection; kidneys; morbidity; mortality; pathogenesis; pathogenicity; patients; virus replication; viruses; China
Abstract:
... H7N9 influenza A first caused human infections in early 2013 in China. Virus genetics, histories of patient exposures to poultry, and previous experimental studies suggest the source of the virus is a domestic avian species, such as chickens. In order to better understand the ecology of this H7N9 in chickens, we evaluated the infectious dose and pathogenesis of A/Anhui/1/2013 H7N9 in two common br ...
Handle:
10113/60566
DOI:
10.1016/j.virol.2015.01.013
PubMed:
25662310
PubMed Central:
PMC4359631
CHORUS:
10.1016/j.virol.2015.01.013
Chorus Open Access:
10.1016/j.virol.2015.01.013

16. Potency, Efficacy, and Antigenic Mapping of H7 Avian Influenza Virus Vaccines Against the 2012 H7N3 Highly Pathogenic Avian Invluenza Virus from Mexico

Author:
Mary Pantin-Jackwood,   et al.   ; Erica Spackman; Xiu-Feng Wan; Darrell Kapczynski; Yifei Xu; David L. Suarez; David Swayne;     Show all 7 Authors
Source:
Avian diseases 2014 v.58 no.3 pp. 359-366
ISSN:
0005-2086
Subject:
Influenza A virus; antigenic variation; chickens; disease prevention; dose response; epitope mapping; genetic distance; hemagglutination; hemagglutination inhibition test; morbidity; mortality; pathogenicity; vaccination; viral vaccines; virulent strains; viruses; wild birds; Mexico
Abstract:
... In the spring of 2012 an outbreak of H7N3 highly pathogenic (HP) avian influenza virus (AIV) occurred in poultry in Mexico. Vaccination was implemented as a control measure, along with increased biosecurity and surveillance. At that time there was no commercially available H7 AIV vaccine in North America; therefore, a recent H7N3 wild bird isolate of low pathogenicity from Mexico (A/cinnamon teal/ ...
Handle:
10113/59857
DOI:
10.1637/10751-121913-Reg.1

17. Short- and long-term protective efficacy against clade 2.3.4.4 H5N2 highly pathogenic avian influenza virus following prime-boost vaccination in turkeys

Author:
Mary Pantin-Jackwood,   et al.   ; Jefferson J.S. Santos; Adebimpe O. Obadan; Stivalis Cardenas Garcia; Silvia Carnaccini; Darrell R. Kapczynski; David L. Suarez; Daniel R. Perez;     Show all 8 Authors
Source:
Vaccine 2017 v.35 no.42 pp. 5637-5643
ISSN:
0264-410X
Subject:
Influenza A virus; animal health; avian influenza; control methods; immune response; longevity; migratory birds; mortality; replicon; turkeys; vaccination; vaccines; viral shedding
Abstract:
... Highly pathogenic avian influenza virus (HPAIV) infections are frequently associated with systemic disease and high mortality in domestic poultry, particularly in chickens and turkeys. Clade 2.3.4.4 represents a genetic cluster within the Asian HPAIV H5 Goose/Guangdong lineage that has transmitted through migratory birds and spread throughout the world. In 2014, clade 2.3.4.4 strains entered the U ...
Handle:
10113/5831658
DOI:
10.1016/j.vaccine.2017.08.059
PubMed:
28886943
PubMed Central:
PMC5659307

18. Avian Influenza Virus with Hemagglutinin-Neuraminidase Combination H8N8, Isolated in Russia

Author:
Mary Pantin-Jackwood,   et al.   ; Mariya V. Sivay; Kirill A. Sharshov; Vladimir V. Muzyka; Alexander M. Shestopalov;     Show all 5 Authors
Source:
Genome Announcements 2014 v.2 no.3 pp. 1-2
ISSN:
2169-8287
Subject:
Influenza A virus; genes; genomics; hemagglutinins; nucleotide sequences; phylogeny; sialidase; Russia
Abstract:
... This study reports the genome sequence of an avian influenza virus (AIV) subtype H8N8 isolated in Russia. The genome analysis shows that all genes belong to AIV Eurasian lineages. The PB2 gene was similar to a Mongolian low pathogenic (LP) AIV H7N1 and a Chinese high pathogenic (HP) AIV H5N2. ...
Handle:
10113/59838
DOI:
10.1128/genomeA.00545-14
PubMed:
no direct match
PubMed Central:
PMC4047453

19. Avian Influenza Virus Wild Bird Surveillance in the Azov and Black Sea Regions of Ukraine (2010-2011)

Author:
Mary Pantin-Jackwood,   et al.   ; Denys Muzyka; Erica Spackman; Borys Stegniy; Oleksandr Rula; Pavlo Shutchenko;     Show all 6 Authors
Source:
Avian diseases 2012 v.56 no.4s1 pp. 1010-1016
ISSN:
0005-2086
Subject:
Anas platyrhynchos; Influenza A virus; autumn; avian influenza; basins; disease surveillance; ducks; ecology; estuaries; feces; geese; genes; hemagglutinins; migratory behavior; nesting; nucleotide sequences; overwintering; pathogenicity; phylogeny; seabirds; serotypes; sialidase; spring; viruses; waterfowl; wild birds; winter; Black Sea; Ukraine
Abstract:
... The Azov and Black Sea basins are part of the transcontinental wild bird migration routes from Northern Asia and Europe to the Mediterranean, Africa, and Southwest Asia. These regions constitute an area of transit, stops during migration, and nesting for many different bird species. From September 2010 to September 2011, a wild bird surveillance study was conducted in these regions to identify avi ...
Handle:
10113/60109
DOI:
10.1637/10157-040912-ResNote.1

20. Characterization of the 2012 Highly Pathogenic Avian Influenza H7N3 Virus Isolated from Poultry in an Outbreak in Mexico: Pathobiology and Vaccine Protection

Author:
Mary Pantin-Jackwood,   et al.   ; Darrell R. Kapczynski; Sofia G. Guzman; Yadira Ricardez; Erica Spackman; Kateri Bertran; David L. Suarez; David E. Swayne;     Show all 8 Authors
Source:
Journal of virology 2013 v.87 no.16 pp. 9086-9096
ISSN:
0022-538X
Subject:
Influenza A virus; anorexia; avian influenza; comb (integument); disease outbreaks; edema; farms; feathers; genes; genetic recombination; hemagglutinins; immunity; inactivated vaccines; laying hens; legs; nucleotide sequences; pathogenicity; ribosomal RNA; sequence analysis; vaccination; viral antigens; virus replication; viruses; wattles; wild birds; Mexico
Abstract:
... In June of 2012, an H7N3 highly pathogenic avian influenza (HPAI) virus was identified as the cause of a severe disease outbreak in commercial laying chicken farms in Mexico. The purpose of this study was to characterize the Mexican 2012 H7N3 HPAI virus (A/chicken/Jalisco/CPA1/2012) and determine the protection against the virus conferred by different H7 inactivated vaccines in chickens. Both adul ...
Handle:
10113/57503
DOI:
10.1128/JVI.00666-13
PubMed:
23760232
PubMed Central:
PMC3754080