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1. Pectobacterium zantedeschiae sp. nov. a new species of a soft rot pathogen isolated from Calla lily (Zantedeschia spp.)

Author:
Mikiciński, Artur,   et al.   ; Waleron, Malgorzata; Misztak, Agnieszka; Waleron, Michal; Franczuk, Martyna; Jońca, Joanna; Wielgomas, Bartosz; Popović, Tatjana; Waleron, Krzysztof;     Show all 9 Authors
Source:
Systematic and applied microbiology 2019 v.42 no.3 pp. 275-283
ISSN:
0723-2020
Subject:
Calla; Pectobacterium carotovorum; Pectobacterium wasabiae; Zantedeschia aethiopica; bulbs; essential genes; leaves; matrix-assisted laser desorption-ionization mass spectrometry; new species; nucleic acid hybridization; pathogens; phylogeny; proteins; sequence analysis; Poland; Serbia
Abstract:
... Four Gram-negative, rod-shaped pectinolytic bacterial strains designated as 2M, 9M, DPMP599 and DPMP600 were subjected to polyphasic analyses that revealed their distinctiveness from the other Pectobacterium species. Strains 2M and 9M were isolated from Calla lily bulbs cultivated in Central Poland. DPMP599 and DPMP600 strains were isolated from Calla lily leaves from plants grown in Serbia. Phylo ...
DOI:
10.1016/j.syapm.2018.08.004

2. Phenolic profiles in apple leaves and the efficacy of selected phenols against fire blight (Erwinia amylovora)

Author:
Mikiciński, Artur,   et al.   ; Skłodowska, Maria; Wielanek, Marzena; Kuźniak, Elżbieta; Sobiczewski, Piotr;     Show all 5 Authors
Source:
European journal of plant pathology 2018 v.151 no.1 pp. 213-228
ISSN:
0929-1873
Subject:
2,5-dihydroxybenzoic acid; Erwinia amylovora; apples; aqueous solutions; cultivars; gallic acid; glucosides; hydroquinone; leaves; naringenin; pathogens; pears; shoots
Abstract:
... The content and type of phenolic compounds in apple leaves as potential markers of resistance to fire blight were analysed. The amounts of phenolic acids and flavonoids were determined before and after E. amylovora inoculation of leaves of two cultivars: ‘Enterprise’ (highly resistant) and ‘Idared’ (highly susceptible). The basic levels of phenolics in both cultivars was similar but, following the ...
DOI:
10.1007/s10658-017-1368-5

3. Evaluation of different RNA extraction methods for high-quality total RNA and mRNA from Erwinia amylovora in planta

Author:
Mikiciński, Artur,   et al.   ; Kałużna, Monika; Kuras, Anita; Puławska, Joanna;     Show all 4 Authors
Source:
European journal of plant pathology 2016 v.146 no.4 pp. 893-899
ISSN:
0929-1873
Subject:
DNA; Erwinia amylovora; apples; deoxyribonuclease I; high-throughput nucleotide sequencing; isolation techniques; messenger RNA; quantitative polymerase chain reaction; ribosomal RNA
Abstract:
... Obtaining a sufficient quantity of high-quality, intact RNA is the first crucial step in its study by RNA sequencing on next-generation sequencing platforms or quantitative PCR. Different RNA extraction methods or commercial kits vary in yield and in the quality and integrity of the RNA obtained, which may affect the results of downstream applications. Often, these factors depend on the organism u ...
DOI:
10.1007/s10658-016-0967-x

4. Antagonistic potential of Pseudomonas graminis 49M against Erwinia amylovora, the causal agent of fire blight

Author:
Mikiciński, Artur,   et al.   ; Sobiczewski, Piotr; Puławska, Joanna; Malusa, Eligio;     Show all 4 Authors
Source:
Archives of microbiology 2016 v.198 no.6 pp. 531-539
ISSN:
0302-8933
Subject:
DNA primers; Erwinia amylovora; Malus domestica; Pseudomonas graminis; agar; antibiotics; biofilm; drought tolerance; ferric chloride; glycerol; growth retardation; homoserine; host plants; lactones; pathogens; phyllosphere; poly(vinyl chloride); polymerase chain reaction; polystyrenes; regulator genes; secondary metabolites; siderophores; sucrose; Poland
Abstract:
... In a previous study (Mikiciński et al. in Eur J Plant Pathol, doi: 10.1007/s10658-015-0837-y , 2015), we described the characterization of novel strain 49M of Pseudomonas graminis, isolated from the phyllosphere of apple trees in Poland showing a good protective activity against fire blight on different organs of host plants. We now report investigations to clarify the basis for this activity. Str ...
DOI:
10.1007/s00203-016-1207-7
PubMed:
27002332
PubMed Central:
PMC4930463

5. Control of fire blight (Erwinia amylovora) by a novel strain 49M of Pseudomonas graminis from the phyllosphere of apple (Malus spp.)

Author:
Mikiciński, Artur,   et al.   ; Sobiczewski, Piotr; Puławska, Joanna; Maciorowski, Robert;     Show all 4 Authors
Source:
European journal of plant pathology 2016 v.145 no.2 pp. 265-276
ISSN:
0929-1873
Subject:
Erwinia amylovora; Malus; Pantoea; Pseudomonas fluorescens; Pseudomonas graminis; apples; bacteria; biobased products; biopesticides; genes; greenhouse experimentation; leaves; orchards; pathogenicity; pears; phenotype; phyllosphere; plant tissues; rain; ribosomal RNA; sequence analysis; shoots; streptomycin; tobacco
Abstract:
... A bacterial isolate called 49M, showing protective activity against fire blight caused by the bacterium Erwinia amylovora, was selected from a large collection of isolates obtained from the apple phyllosphere and was identified as Pseudomonas graminis, based on its phenotype and sequence analysis of the 16S rRNA and rpoD genes. The efficacy of strain 49M under laboratory and greenhouse conditions ...
DOI:
10.1007/s10658-015-0837-y

6. Evaluation of methods for erwinia amylovora detection

Author:
Mikiciński, Artur,   et al.   ; Kałużna, Monika; Puławska, Joanna;     Show all 3 Authors
Source:
Journal of Horticultural Research 2014 v.21 no.2 pp. 65-71
ISSN:
2353-3978
Subject:
Erwinia amylovora; melting; microbial detection; quantitative polymerase chain reaction
Abstract:
... Phytosanitary measures to control diseases require sensitive and reliable detection methods. In case of Erwinia amylovora, the causal agent of fire blight, there are several methods developed. We tested six of them: (1) a conventional method; (2) standard PCR; (3) BIO-PCR; (4) Real-time PCR with SYBR Green; (5) Real-time PCR with TaqMan probe; and (6) Loop Mediated Isothermal Amplification (LAMP) ...
DOI:
10.2478/johr-2013-0023

7. Susceptibility of apple genotypes from European genetic resources to fire blight (Erwinia amylovora)

Author:
Mikiciński, Artur,   et al.   ; Sobiczewski, Piotr; Peil, Andreas; Richter, Klaus; Lewandowski, Mariusz; Żurawicz, Edward; Kellerhals, Markus;     Show all 7 Authors
Source:
European journal of plant pathology 2015 v.141 no.1 pp. 51-62
ISSN:
0929-1873
Subject:
Erwinia amylovora; apples; breeding; clones; cultivars; genotype; greenhouses; horticulture; inoculation methods; inoculum; leaves; necrosis; shoots; trees; virulence; virulent strains; Belgium; Germany; Hungary; Poland; Sweden; Switzerland
Abstract:
... The study was conducted in greenhouses at two locations on one-year old trees of apple cultivars and clones originating from genetic resources and breeding programs conducted in Belgium, Hungary, Germany, Poland, Sweden and Switzerland. At each location different inoculation method of trees with Erwinia amylovora was used. In Poland, at the Research Institute of Horticulture in Skierniewice (IO), ...
DOI:
10.1007/s10658-014-0521-7

8. Efficacy of fungicides and essential oils against bacterial diseases of fruit trees

Author:
Mikiciński, Artur,   et al.   ; Sobiczewski, Piotr; Berczyński, Stanisław;     Show all 3 Authors
Source:
Journal of plant protection research 2012 v.52 no.4 pp. 467-471
ISSN:
1899-007X
Subject:
in vivo studies; Helianthus annuus; Erwinia amylovora; apples; copper oxychloride; sage; seedlings; bacterial canker; essential oils; plant organs; fruit trees; Agrobacterium radiobacter; crown galls; pears; tolylfluanid; pathogens; Lavandula; Melissa officinalis; fruit diseases; oils; in vitro studies; virulent strains; antibacterial properties; Prunus avium; mancozeb; cloves; thyme; Xanthomonas arboricola; Pseudomonas syringae pv. syringae; captan; active ingredients; bacteria
Abstract:
... In the framework of the performed studies, the antibacterial activity of the following fungicides was evaluated: Miedzian 50 WG (active substance - a.s. 50% copper oxychloride), Ridomil MZ Gold 68 WG (a.s. 3.8% metalaxyl-M and 64%, mancozeb), Euparen Multi 50 WG (a.s. 50% tolylfluanid), Captan 80 WG [a.s. 80% N-(captan)], Dithane Neotec 75 WG (a.s. 75% mancozeb). The evaluation also concerned the ...
DOI:
10.2478/v10045-012-0075-7

9. Effects of silvicultural techniques on the diversity of microorganisms in forest soil and their possible participation in biological control of Armillaria and Heterobasidion

Author:
Mikiciński, Artur,   et al.   ; Kwaśna, Hanna; Walkowiak, Lucyna; Łakomy, Piotr; Behnke-Borowczyk, Jolanta; Gornowicz, Roman; Gałązka, Stanisław; Szewczyk, Wojciech;     Show all 8 Authors
Source:
Journal of plant protection research 2015 v.55 no.3 pp. 241-253
ISSN:
1899-007X
Subject:
Armillaria; Ascomycota; Heterobasidion; Pinus sylvestris; Zygomycota; biological control; biomass; clearcutting; conservation practices; deep tillage; forest soils; fungi; mortality; physicochemical properties; plowing; ridging; silvicultural practices; temperate forests; wood; Poland
Abstract:
... Effects of different pre-planting soil preparations and post-harvest wood debris applications in a clear-cut Scots pine plantation, on the abundance, diversity, and activity of culturable microorganisms were investigated. The investigation was done 9 years after the re-plantings had been done. This formed part of an investigation of silvicultural practices for conservation and the biological contr ...
DOI:
10.1515/jppr-2015-0034

10. Detection, isolation, and preliminary characterization of bacteria contaminating plant tissue cultures

Author:
Mikiciński, Artur,   et al.   ; Kałużna, Monika; Sobiczewski, Piotr; Zawadzka, Marta; Zenkteler, Elżbieta; Orlikowska, Teresa;     Show all 6 Authors
Source:
Acta agrobotanica 2014 v.66 no.4 pp. 81-92
ISSN:
2300-357X
Subject:
Agrobacterium; Curtobacterium; DNA; Flavobacterium; Lactobacillus; Methylobacterium; Mycobacterium; Paenibacillus; Pseudomonas; Serratia marcescens; Stenotrophomonas; Xanthomonas; albumins; bacteria; boiling; detection limit; explants; fluorescence; microbial detection; milk; plant cultural practices; plant tissues; polymerase chain reaction; secretion; surveys; tissue culture
Abstract:
... In order to limit the contamination problem in plant tissue cultures experiments on selection of media suitable for detection and isolation of bacteria contaminating plant tissue explants, and preliminary characterization of isolates were made. In the first experiment aiming at detection of bacteria in plant explants four strains representing genera most often occurring at our survey of plant tiss ...
DOI:
10.5586/aa.2013.054

11. Morphological and biochemical characterization of Erwinia amylovora-induced hypersensitive cell death in apple leaves

Author:
Mikiciński, Artur,   et al.   ; Iakimova, Elena T.; Sobiczewski, Piotr; Michalczuk, Lech; Węgrzynowicz-Lesiak, Elżbieta; Woltering, Ernst J.;     Show all 6 Authors
Source:
Plant physiology and biochemistry 2013 v.63 pp. 292-305
ISSN:
0981-9428
Subject:
Erwinia amylovora; apoptosis; apples; cell walls; cultivars; ethylene; ethylene inhibitors; ethylene production; gene expression; genotype; hypersensitive response; leaves; proteinases; reactive oxygen species; shrinkage; signal transduction; tobacco
Abstract:
... In attached apple leaves, spot-inoculated with Erwinia amylovora, the phenotypic appearance of the hypersensitive response (HR) and the participation of ethylene, reactive oxygen species (ROS) and of vacuolar processing enzyme (VPE) (a plant caspase-1-like protease) were analysed. The HR in both the resistant and susceptible genotypes expressed a similar pattern of distinguishable micro HR lesions ...
DOI:
10.1016/j.plaphy.2012.12.006
PubMed:
23321023

12. BTH-mediated antioxidant system responses in apple leaf tissues

Author:
Mikiciński, Artur,   et al.   ; Skłodowska, Maria; Gajewska, Ewa; Kuźniak, Elżbieta; Sobiczewski, Piotr;     Show all 5 Authors
Source:
Scientia horticulturae 2010 v.125 no.1 pp. 34-40
ISSN:
0304-4238
Subject:
plant pathogenic bacteria; tocopherols; Erwinia amylovora; apples; ascorbate peroxidase; lipid peroxidation; mechanism of action; phenylalanine ammonia-lyase; systemic acquired resistance; glutathione transferase; disease resistance; Malus domestica; superoxide anion; leaves; bacterial diseases of plants; antioxidant activity; free radicals; catalase; plant growth substances; biochemical pathways; glutathione peroxidase; fruit crops
Abstract:
... BTH (S-methylbenzo-1,2,3-thiadiazole-7-carbothiate), an active compound of the commercial preparation Bion, has been studied as an elicitor of resistance to fire blight (Erwinia amylovora) in apple. However, the biochemical mechanisms of its action are not fully elucidated. Our study indicated that BTH at the best time of its protection activity (2-14 days after application) induced changes in pro ...
DOI:
10.1016/j.scienta.2010.02.019

13. Pectolytic Bacteria Associated with Soft Rot of Calla Lily (Zantedeschia spp.) Tubers

Author:
Mikiciński, Artur,   et al.   ; Sobiczewski, Piotr; Sulikowska, Monika; Puławska, Joanna; Treder, Jadwiga;     Show all 5 Authors
Source:
Phytopathologische Zeitschrift 2010 v.158 no.4 pp. 201-209
ISSN:
0931-1785
Subject:
Chryseobacterium indologenes; Gram-negative bacteria; Pectobacterium carotovorum subsp. atrosepticum; Pectobacterium carotovorum subsp. carotovorum; Pseudomonas marginalis; Pseudomonas veronii; Zantedeschia aethiopica; agar; gentian violet; nucleotide sequences; petioles; phenotype; plant pathogens; potatoes; ribosomal RNA; tubers; Poland
Abstract:
... Soft rot is the most important disease on calla lily in Poland. The isolation of the presumptive pathogen from symptomatic tubers on nutrient agar yielded bacteria with different colony morphology. Of 41 isolates collected, 10 showed pectolytic activity on crystal violet pectate medium and caused soft rot on potato slices. All pectolytic bacteria appeared to be Gram-negative rods producing typical ...
DOI:
10.1111/j.1439-0434.2009.01597.x

14. Assessment of fire blight tolerance in apple based on plant inoculations with Erwinia amylovora and DNA markers

Author:
Mikiciński, Artur,   et al.   ; Nybom, Hilde; Garkava-Gustavsson, Larisa; Sehic, Jasna; Lewandowski, Mariusz; Sobiczewski, Piotr;     Show all 6 Authors
Source:
Trees 2012 v.26 no.1 pp. 199-213
ISSN:
0931-1890
Subject:
Erwinia amylovora; alleles; apples; cultivars; disease resistance; disease severity; genetic markers; germplasm; homozygosity; loci; marker-assisted selection; microsatellite repeats; necrosis; orchards; progeny; quantitative trait loci; shoots; trees
Abstract:
... Fire blight (Erwinia amylovora) causes serious damage to pome fruit orchards, and identification of germplasm with heritable disease resistance is therefore crucial. Two dominant SCAR (sequence characterised amplified region) marker alleles (AE10-375 and GE-8019), flanking a previously identified QTL (quantitative trait locus) for resistance to fire blight on ‘Fiesta’ linkage group 7 in apple cult ...
DOI:
10.1007/s00468-011-0649-4

15. Antioxidant Profile and Polyphenol Oxidase Activities in Apple Leaves after Erwinia amylovora Infection and Pretreatment with a Benzothiadiazole-type Resistance Inducer (BTH)

Author:
Mikiciński, Artur,   et al.   ; Skłodowska, Maria; Gajewska, Ewa; Kuźniak, Elżbieta; Wielanek, Marzena; Sobiczewski, Piotr;     Show all 6 Authors
Source:
Phytopathologische Zeitschrift 2011 v.159 no.7-8 pp. 495-504
ISSN:
0031-9481
Subject:
metabolism; Erwinia amylovora; apples; glutathione; phenylalanine ammonia-lyase; catalase; ascorbate peroxidase; catechol oxidase; glutathione transferase; phenolic acids; thiobarbituric acid-reactive substances; pathogens; glutathione peroxidase; chlorogenic acid; superoxide anion; antioxidant activity; leaves; fire resistance
Abstract:
... This study focused on the biochemical effects of benzo-(1,2,3)-thiadiazole-7-carbothioic acid S-methyl ester (BTH), an active compound of the commercial preparation Bion, as an elicitor of resistance to fire blight (Erwinia amylovora) in apple. We determined activities of main antioxidant enzymes: ascorbate peroxidase (APX), catalase, glutathione peroxidase (GSH-Px) and glutathione transferase (GS ...
DOI:
10.1111/j.1439-0434.2011.01793.x