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1. Evolution in the light of fitness landscape theory

Author:
Fragata, Inês; Blanckaert, Alexandre; Dias Louro, Marco António; Liberles, David A.; Bank, Claudia
Source:
Trends in ecology & evolution 2019 v.34 no.1 pp. 69-82
ISSN:
0169-5347
Subject:
genotype,   etc   ; evolution; models; molecular biology; phenotype;     Show all 5 Subjects
Abstract:
... By formalizing the relationship between genotype or phenotype and fitness, fitness landscapes harbor information on molecular and evolutionary constraints. The shape of the fitness landscape determines the potential for adaptation and speciation, as well as our ability to predict evolution. Consequently, fitness landscape theory has been invoked across the natural sciences and across multiple leve ...
DOI:
10.1016/j.tree.2018.10.009

2. Impact of Environment and Genotype‐by‐Environment Interaction on Functional Properties of Amylose‐Free and Wildtype Cassava Starches

Author:
Karlström, Amanda; Belalcazar, John; Sánchez, Teresa; Lenis, Jorge I.; Moreno, John L.; Pizarro, Mónica; Ricci, Julien; Dufour, Dominique; Tran, Thierry; Ceballos, Hernán
Source:
DieStärke = 2019 v.71 no.1-2 pp. e1700278
ISSN:
0038-9056
Subject:
genotype; genotype-environment interaction,   etc   ; altitude; analysis of variance; cassava; clones; functional properties; starch granules; viscosity;     Show all 9 Subjects
Abstract:
... Ten and thirty cassava genotypes producing wildtype and amylose‐free (waxy) starch respectively, are grown at low (LA) and intermediate (IA) altitudes (<213 and >900 m above sea level (m.a.s.l.) respectively). The functional properties of the starch from these materials are analyzed. The relative importance of environment, clones (within starch type) and genotype‐by‐environment interaction (GxE) i ...
DOI:
10.1002/star.201700278

3. Yield performances of Asiatic pennyworth accessions evaluated in multi environment trials in West Java, Indonesia

Author:
Bermawie, N.; Purwiyanti, S.; Syakir, M.
Source:
Acta horticulturae 2018 no.1205 pp. 811-816
ISSN:
0567-7572
Subject:
genotype; genotype-environment interaction,   etc   ; environmental factors; Indonesia;     Show all 4 Subjects
Abstract:
... Yield and asiaticoside contents may be influenced by genotype and environmental condition. Approaches to improve the herbal production with desired asiaticoside contents have been done by selecting potential accessions and grown at several agro ecological locations. The objectives of the study were to evaluate herbal yield and contents of asiaticoside stability of five accessions in six different ...
DOI:
10.17660/ActaHortic.2018.1205.102

4. Correction to: Fraction of high-grade cervical intraepithelial lesions attributable to genotypes targeted by a nonavalent HPV vaccine in Galicia, Spain

Author:
Perez, S.; Iñarrea, A.; Pérez-Tanoira, R.; Gil, M.; López-Díez, E.; Valenzuela, O.; Porto, M.; Alberte-Lista, L.; Peteiro-Cancelo, M. A.; Treinta, A.; Carballo, R.; Reboredo, M. C.; Alvarez-Argüelles, M. E.; Purriños, M. J.
Source:
Virology journal 2018 v.15 no.1 pp. 41
ISSN:
1743-422X
Subject:
genotype,   etc   ; vaccines; Spain;     Show all 3 Subjects
Abstract:
... After publication of the article [1], it was brought to our attention that the author E. López-Díez is missing their second affiliation. The author would also like to indicate an affiliation to “Universidade de Vigo, Pontevedra, Spain”. ...
DOI:
10.1186/s12985-018-0953-3

5. Human-Mediated Dispersal and the Rewiring of Spatial Networks

Author:
Bullock, James M.; Bonte, Dries; Pufal, Gesine; da Silva Carvalho, Carolina; Chapman, Daniel S.; García, Cristina; García, Daniel; Matthysen, Erik; Delgado, Maria Mar
Source:
Trends in ecology & evolution 2018 v.33 no.12 pp. 958-970
ISSN:
0169-5347
Subject:
genotype,   etc   ; landscapes; prediction;     Show all 3 Subjects
Abstract:
... Humans fundamentally affect dispersal, directly by transporting individuals and indirectly by altering landscapes and natural vectors. This human-mediated dispersal (HMD) modifies long-distance dispersal, changes dispersal paths, and overall benefits certain species or genotypes while disadvantaging others. HMD is leading to radical changes in the structure and functioning of spatial networks, whi ...
DOI:
10.1016/j.tree.2018.09.008

6. Does kernel position on the cob affect zeaxanthin, lutein and total carotenoid contents or quality parameters, in zeaxanthin-biofortified sweet-corn?

Author:
Calvo-Brenes, Paula; Fanning, Kent; O'Hare, Tim
Source:
Food chemistry 2019 v.277 pp. 490-495
ISSN:
0308-8146
Subject:
genotype,   etc   ; biofortification; lutein; maturity stage; seeds; sweetcorn; zeaxanthin;     Show all 7 Subjects
Abstract:
... Influence of kernel position on zeaxanthin, lutein, total carotenoid (TC) and quality parameters was evaluated in a zeaxanthin-biofortified and a commercial yellow sweet-corn. Cobs were harvested at six different maturity stages, and the above variables in kernels from the tip-end, middle and base of the cobs were analysed. Kernels from the tip-end had highest zeaxanthin and TC in the zeaxanthin b ...
DOI:
10.1016/j.foodchem.2018.10.141

7. Russeting partially restores apple skin permeability to water vapour

Author:
Khanal, Bishnu P.; Ikigu, Godfrey M.; Knoche, Moritz
Source:
Planta 2019 v.249 no.3 pp. 849-860
ISSN:
0032-0935
Subject:
genotype,   etc   ; apple peels; apples; fruits; models; periderm; permeability; water vapor;     Show all 8 Subjects
Abstract:
... MAIN CONCLUSION: The higher water loss of russeted fruit results from the higher permeance of the periderm of the russeted skin as compared to that of the intact cuticle and epidermis. Apple fruit surfaces are often in-parallel composites, comprising areas of intact cuticle (atop a healthy epidermis) adjacent to areas covered by periderm (so-called russet). The occurrence of non-russeting and russ ...
DOI:
10.1007/s00425-018-3044-1

8. An overview of grafting re-establishment in woody fruit species

Author:
Baron, Daniel; Esteves Amaro, Amanda Cristina; Pina, Ana; Ferreira, Gisela
Source:
Scientia horticulturae 2019 v.243 pp. 84-91
ISSN:
0304-4238
Subject:
genotype,   etc   ; callus; fruits; graft compatibility; herbaceous plants; juveniles;     Show all 6 Subjects
Abstract:
... The formation of a successful graft includes a series of biological steps involving immediate responses to the wound, such as callus and functional vascular system formation between graft partners. However, grafts are not always successful when different genotypes (plant species) are grafted, resulting in tissue union and regeneration problems—popularly known as graft incompatibility. Numerous stu ...
DOI:
10.1016/j.scienta.2018.08.012

9. Prevalence of hepatitis C virus NS5A resistance-associated substitutions in chronic infection with genotype 1: A pooled analysis based on deposited sequences in GenBank

Author:
Sharafi, Heidar; Maleki, Saeideh; Alavian, Seyed Moayed
Source:
Virus research 2019 v.259 pp. 54-61
ISSN:
0168-1702
Subject:
genotype,   etc   ; Hepatitis C virus; amino acids; genes; patients;     Show all 5 Subjects
Abstract:
... Resistance-associated substitutions (RASs) in the NS5A gene of hepatitis C virus (HCV) has been studied as one of the predictors of response to NS5A inhibitor-containing regimens. This study aimed to evaluate the prevalence of pre-treatment naturally-occurring NS5A RASs in HCV isolates from patients with chronic HCV genotype 1 (HCV-1) infection retrieved from GenBank.In the search procedure, the s ...
DOI:
10.1016/j.virusres.2018.10.014

10. Interaction: Fisher’s Optimal Scores Revisited

Author:
Gower, JohnC.; Gardner-Lubbe, Sugnet; Le Roux, NielJ.
Source:
Journal of agricultural, biological, and environmental statistics 2018 v.23 no.1 pp. 92-112
ISSN:
1085-7117
Subject:
genotype; genotype-environment interaction,   etc   ; crops; models; statistics; variety trials;     Show all 6 Subjects
Abstract:
... The normal way of fitting a bilinear model to values of a quantitative variable classified by rows and columns is first to fit the main effects of rows and columns and then fit a biadditive model to the residual table. This gives the ordinary least squares optimal fit, usually visualised by biplots and, among other applications areas, is routinely used in genotype [Formula: see text] environment t ...
DOI:
10.1007/s13253-017-0311-8

11. Correction to: Acanthamoeba of three morphological groups and distinct genotypes exhibit variable and weakly inter-related physiological properties

Author:
Possamai, CynaraOliveira; Loss, AnaCarolina; Costa, AdrianaOliveira; Falqueto, Aloisio; Furst, Cinthia
Source:
Parasitology research 2018 v.117 no.6 pp. 1995
ISSN:
0932-0113
Subject:
genotype,   etc   ; Acanthamoeba; microbial physiology; Brazil;     Show all 4 Subjects
Abstract:
... The authors recognized a mistake in Abstract and in the Discussion section. ...
DOI:
10.1007/s00436-018-5884-9

12. Correction to: Transcriptome profiling of fully open flowers in a frost‑tolerant almond genotype in response to freezing stress

Author:
Hosseinpour, Batool; Sepahvand, Sadegh; Aliabad, KazemKamali; Bakhtiarizadeh, MohammadReza; Imani, Ali; Assareh, Reza; Salami, SeyedAlireza
Source:
Molecular genetics and genomics 2018 v.293 no.1 pp. 165
ISSN:
1617-4615
Subject:
genotype,   etc   ; almonds; cold stress; transcriptomics;     Show all 4 Subjects
Abstract:
... In the original publication of the article, the affiliation of the third author has been incorrectly published as University of Yazd. However, the correct affiliation is Yazd University. ...
DOI:
10.1007/s00438-017-1380-7

13. Phenotypic stability of eggplant for yield and quality through AMMI, GGE and cluster analyses

Author:
Koundinya, A.V.V.; Pandit, M.K.; Ramesh, D.; Mishra, P.
Source:
Scientia horticulturae 2019 v.247 pp. 216-223
ISSN:
0304-4238
Subject:
genotype; genotype-environment interaction,   etc   ; 2,2-diphenyl-1-picrylhydrazyl; anthocyanins; cluster analysis; eggplants; free radical scavengers; fruit quality; fruit yield; fruits; germplasm; models; phenotype; variance; yield components;     Show all 15 Subjects
Abstract:
... The experiment was carried out in four consecutive seasons to study the phenotypic stability of eggplant germplasm for yield components and fruit quality parameters. The data were subjected to modern statistical tools like Additive Main effects and Multiplicative Interaction (AMMI) model and the Genotype main effects and Genotype × Environment Interaction effects (GGE) model and Cluster Analysis. ...
DOI:
10.1016/j.scienta.2018.12.019

14. Genetic variability-, genotype × environment interactions- and combining ability-analyses of kernel tocopherols among maize genotypes possessing novel allele of γ-tocopherol methyl transferase (ZmVTE4)

Author:
Das, Abhijit K.; Muthusamy, Vignesh; Zunjare, Rajkumar U.; Chauhan, Hema S.; Sharma, Pawan K.; Bhat, Jayant S.; Guleria, Satish K.; Saha, Supradip; Hossain, Firoz
Source:
Journal of cereal science 2019 v.86 pp. 1-8
ISSN:
0733-5210
Subject:
genotype; genotype-environment interaction,   etc   ; additive gene effects; alleles; alpha-tocopherol; biofortification; corn; delta-tocopherol; environmental impact; gamma-tocopherol; humans; hybrids; nervous system diseases; seeds; transferases;     Show all 15 Subjects
Abstract:
... Deficiency of vitamin-E or tocopherol causes neurological disorders in humans. α-tocopherol possessing the highest vitamin-E activity is present in low concentration in maize kernel. Nine lines and four testers possessing favourable allele of ZmVTE4 that significantly enhances vitamin-E activity were used to generate 36 hybrid combinations. Significant variation was observed for α- (5.95–39.03 μg/ ...
DOI:
10.1016/j.jcs.2018.12.018

15. Exploiting genotype x environment x management interactions to enhance maize productivity in Ethiopia

Author:
Seyoum, Solomon; Rachaputi, Rao; Fekybelu, Solomon; Chauhan, Yash; Prasanna, Boddupalli
Source:
European journal of agronomy 2019 v.103 pp. 165-174
ISSN:
1161-0301
Subject:
genotype; genotype-environment interaction,   etc   ; best management practices; corn; crop yield; farmers; hybrids; leaves; phenology; plant density; radiation use efficiency; rain; risk; staple crops; Ethiopia;     Show all 15 Subjects
Abstract:
... Maize is the main staple food crop grown by smallholder farmers in Ethiopia. High variability in inter-seasonal rainfall presents the biggest risk for farmers to invest in best management practices in maize crop grown in Ethiopia. Optimising genotype (G) and management (M) of maize for different growing environments (E) could alleviate risks associated with seasonal rainfall variability and enhanc ...
DOI:
10.1016/j.eja.2018.12.011

16. Can nitrogen fertilization be used to modulate yield, protein content and bread-making quality in Uruguayan wheat?

Author:
Vazquez, Daniel; Berger, Andres; Prieto-Linde, Maria Luisa; Johansson, Eva
Source:
Journal of cereal science 2019 v.85 pp. 153-161
ISSN:
0733-5210
Subject:
genotype; genotype-environment interaction,   etc   ; breadmaking quality; cultivars; fertilizer application; grain protein; high performance liquid chromatography; nitrogen; nitrogen fertilizers; protein content; wheat;     Show all 11 Subjects
Abstract:
... Genotype and environment jointly determine yield and bread-making quality of bread wheat, being possible modulators for these characters. Eleven cultivars were grown at three different nitrogen regimes combining quantity and timing of nitrogen availability for two years; yield, grain protein concentration and Alveograph parameters were determined. Amount and size distribution of proteins were meas ...
DOI:
10.1016/j.jcs.2018.12.001

17. Prescreening in large populations as a tool for identifying elevated CO2-responsive genotypes in plants

Author:
Shimono, Hiroyuki; Farquhar, Graham; Brookhouse, Matthew; Busch, Florian A.; O'Grady, Anthony; Tausz, Michael; Pinkard, Elizabeth A.
Source:
Functional plant biology 2019 v.46 no.1 pp. 1-14
ISSN:
1445-4408
Subject:
genotype; genotype-phenotype correlation,   etc   ; C3 plants; carbon dioxide; carbon dioxide enrichment; crops; cultivars; forests; fumigation; germplasm; intraspecific variation; natural selection; phenotype; photosynthesis; screening; sequence analysis;     Show all 16 Subjects
Abstract:
... Elevated atmospheric CO2 concentration (e[CO2]) can stimulate the photosynthesis and productivity of C3 species including food and forest crops. Intraspecific variation in responsiveness to e[CO2] can be exploited to increase productivity under e[CO2]. However, active selection of genotypes to increase productivity under e[CO2] is rarely performed across a wide range of germplasm, because of const ...
DOI:
10.1071/FP18087

18. The pomological characterization of walnut (Juglans regia L.) to select the superior genotypes – An opportunity for genetic improvement

Author:
Khadivi, Ali; Montazeran, Arefeh; Rezaei, Mehdi; Ebrahimi, Aziz
Source:
Scientia horticulturae 2019 v.248 pp. 29-33
ISSN:
0304-4238
Subject:
genotype,   etc   ; Juglans regia; cultivars; fruits; genetic improvement; orchards; parents; phenotypic variation; seedlings; seeds; walnuts;     Show all 11 Subjects
Abstract:
... Persian walnut (Juglans regia L.), the cultivated walnut species for nut production, is one of the main oldest food sources. In the present investigation, a total of 908 walnut seedling originated genotypes were studied to detect the phenotypic variation and to select the superior genotypes based on the fruit traits. Considerable phenotypic variation was found among the genotypes based on the meas ...
DOI:
10.1016/j.scienta.2018.12.054

19. Physicochemical and sensorial characteristics of beef burgers with added tannin and tannin-free whole sorghum flours as isolated soy protein replacer

Author:
do Prado, Maria Emília Araújo; Queiroz, Valéria Aparecida Vieira; Correia, Vinicius Tadeu da Veiga; Neves, Erick Ornellas; Roncheti, Elder Felipe Silva; Gonçalves, Aline Cristina Arruda; de Menezes, Cícero Beserra; de Oliveira, Fernanda Cristina Esteves
Source:
Meat science 2019 v.150 pp. 93-100
ISSN:
0309-1740
Subject:
genotype,   etc   ; antioxidants; beef; color; flavor; physicochemical properties; proximate composition; raw meat; sorghum flour; soy protein; texture;     Show all 11 Subjects
Abstract:
... The physicochemical and sensorial characterization of beef burgers with added sorghum flours as replacer for the isolated soy protein (ISP) usually used in the conventional formulations was performed. Three formulations were prepared: one conventional (CN) with 3% ISP and two with 3% tannin (BRS 305) and tannin-free (BR 501) whole sorghum flour (WSF) of BRS 305 and BR 501 genotypes. There was no d ...
DOI:
10.1016/j.meatsci.2018.12.006

20. Physiological mechanisms for antagonistic interaction of manganese and aluminum in barley

Author:
Muhammad, Noor; Zvobgo, Gerald; Fu, Liangbo; Wa Lwalaba, Jonas Lwalaba; Zhang, Gouping
Source:
Journal of plant nutrition 2019 v.42 no.5 pp. 466-476
ISSN:
1532-4087
Subject:
genotype,   etc   ; adenosinetriphosphatase; aluminum; barley; enzyme activity; greenhouses; malondialdehyde; manganese; phytomass; plant tissues;     Show all 10 Subjects
Abstract:
... In a previous study, we found that the combined addition of Al and Mn in the culture solution could alleviate the inhibition of barley growth by addition of Al or Mn alone. The current experiment was conducted in a greenhouse to investigate the physiological mechanisms of the antagonistic interaction using two barley genotypes, XZ16 (both Al and Mn tolerant) and ZU9 (both Al and Mn sensitive). The ...
DOI:
10.1080/01904167.2019.1567767