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Transcriptome analysis of gill tissue of Atlantic cod Gadus morhua L. from the Baltic Sea

Author:
Małachowicz, Magdalena, Kijewska, Agnieszka, Wenne, Roman
Source:
Marine genomics 2015 v.23 pp. 37-40
ISSN:
1874-7787
Subject:
Gadus morhua, marine fish, sequence analysis, transcriptome, transcriptomics, Atlantic Ocean, Baltic Sea
Abstract:
The Atlantic cod (Gadus morhua L.) is one of the most ecologically and economically important marine fish species in the North Atlantic Ocean. Using Roche GS-FLX 454 pyrosequencing technique 962,516 reads, representing 379Mbp of the Baltic cod transcriptome, were obtained. Data was assembled into 14,029 contigs of which 100% displayed homology to the Atlantic cod transcriptome. Despite a high similarity between transcripts, evidence for significant differences between Baltic and Atlantic cod was found.
Agid:
5443574