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Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil

Author:
Melo, Ricardo Rodrigues de, Persinoti, Gabriela Felix, Paixão, Douglas Antonio Alvaredo, Squina, Fábio Márcio, Ruller, Roberto, Sato, Helia Harumi
Source:
Brazilian journal of microbiology 2017 v.48 no.4 pp. 612-614
ISSN:
1517-8382
Subject:
Streptomyces, biomass, genes, genome assembly, glycosidases, nucleotide sequences, proteins, secretion, soil, soil bacteria
Abstract:
Here, we show the draft genome sequence of Streptomyces sp. F1, a strain isolated from soil with great potential for secretion of hydrolytic enzymes used to deconstruct cellulosic biomass. The draft genome assembly of Streptomyces sp. strain F1 has 69 contigs with a total genome size of 8,142,296bp and G+C 72.65%. Preliminary genome analysis identified 175 proteins as Carbohydrate-Active Enzymes, being 85 glycoside hydrolases organized in 33 distinct families. This draft genome information provides new insights on the key genes encoding hydrolytic enzymes involved in biomass deconstruction employed by soil bacteria.
Agid:
5628944