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Characterization of the complete genome of euonymus yellow vein associated virus, a distinct member of the genus Potexvirus, family Alphaflexiviridae, isolated from Euonymus bungeanus Maxim in Liaoning, Northern China

Author:
Yang, Caixia, Han, Tong, Fu, Jingjing, Liao, Yiming, Chen, Sha
Source:
Archives of virology 2018 v.163 no.2 pp. 563-566
ISSN:
0304-8608
Subject:
Clover yellow mosaic virus, Euonymus hamiltonianus var. maackii, Strawberry mild yellow edge virus, White clover mosaic virus, coat proteins, genes, high-throughput nucleotide sequencing, leaves, nucleotides, open reading frames, phylogeny, sequence homology, viruses, China
Abstract:
In August 2016, a yellow vein disease was observed on leaves of Euonymus bungeanus Maxim (Euonymus, Celastraceae) in Liaoning, China. Virions measuring 750 × 13 nm were observed in a sample from the diseased plant. A potexvirus was detected in the sample by small-RNA deep sequencing analysis and recovered by traditional cloning. The genome of this potexvirus consists of 7,279 nucleotides, excluding the poly(A) tail at the 3’ end, and contains five open reading frames (ORFs). Based on the nucleotide and amino acid sequences of the coat protein gene, the virus shared the highest sequence similarity with white clover mosaic virus (WCMV, X16636) (40.1%) and clover yellow mosaic virus (ClYMV, D00485) (37.1%). Phylogenetic analysis showed that the virus clustered with potexviruses and is most closely related to strawberry mild yellow edge virus. These results indicate that this virus is a distinct member of the genus Potexvirus, for which the name euonymus yellow vein associated virus (EuYVAV) is proposed. To our knowledge, this is the first report of a potexvirus on E. bungeanus.
Agid:
5901136