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Assessment of replicate numbers for titrating avian influenza virus using dose-response models

Author:
Spackman, Erica, Malladi, Sasidhar, Ssematimba, Amos, Stephens, Christopher B.
Source:
Journal of veterinary diagnostic investigation 2019 v.31 no.4 pp. 616-619
ISSN:
1943-4936
Subject:
Influenza A virus, Monte Carlo method, Weibull statistics, chicken eggs, confidence interval, cost effectiveness, dose response, standard deviation, statistical models, titration, viral load
Abstract:
Embryonating chicken eggs (ECEs) are among the most sensitive laboratory host systems for avian influenza virus (AIV) titration, but ECEs are expensive and require space for storage and incubation. Therefore, reducing ECE use would conserve resources. We utilized statistical modeling to evaluate the accuracy and precision of AIV titration with 3 instead of 5 ECEs for each dilution by the Reed–Muench method for 50% endpoint calculation. Beta-Poisson and exponential dose-response models were used in a simulation study to evaluate observations from actual titration data from 18 AIV isolates. The reproducibility among replicates of a titration was evaluated with one AIV isolate titrated in 3 replicates with the beta-Poisson, exponential, and Weibull dose-response models. The standard deviation (SD) of the error between input and estimated virus titers was estimated with Monte Carlo simulations using the fitted dose-response models. Good fit was observed with all models that were utilized. Reducing the number of ECEs per dilution from 5 to 3 resulted in the width of the 95% confidence interval increasing from ±0.64 to ±0.75 log₁₀ 50% ECE infectious doses (EID₅₀) and the SD of the error increased by 0.03 log₁₀ EID₅₀. Our study suggests that using fewer ECEs per dilution is a viable approach that will allow laboratories to reduce costs and improve efficiency.
Agid:
6556978
Handle:
10113/6556978